Pairwise Alignments

Query, 416 a.a., Colistin resistance protein EmrA from Xanthobacter sp. DMC5

Subject, 406 a.a., HlyD family secretion protein from Vibrio cholerae E7946 ATCC 55056

 Score =  239 bits (610), Expect = 1e-67
 Identities = 143/360 (39%), Positives = 212/360 (58%), Gaps = 20/360 (5%)

Query: 58  ARSRKPFIFGTVLAVLAVAGGWYGLNWWQVGRFQVSTDDAYVAADTSVIAAKVGGYVKSV 117
           A+SRK    G   A++ VAGG Y L W  +G   +STD+AY AA+ + +   VGG +  V
Sbjct: 27  AQSRKKGFLGLAAAIV-VAGGSYALYWHFIGSRYISTDNAYAAAEIAEVTPAVGGIIAQV 85

Query: 118 DVDTNQWVKAGDVIARIDDGDYRLALQSAENKIATQEATLSRFDQQETAARATVD----- 172
           +V   ++VK GDV+ ++DD D RLAL  AE  +A  +  +  +   +    A V+     
Sbjct: 86  NVVDTEYVKQGDVLVQLDDTDARLALLQAEADLALAKRRVRSYLANDEGLSAMVEAQEAN 145

Query: 173 --QMKAQLASAEADQRRAQAEFDRQDKLARSDFASRSTLDNARADKDKTAASVEAAKAAI 230
             ++KAQL +A+AD  RA+ +  R++ L RS   S   L NA+    +  A++ AAKAA+
Sbjct: 146 EQRVKAQLKAAQADFERAKIDLSRREDLVRSGSVSGEELTNAKTGFAQAQANLNAAKAAM 205

Query: 231 ASAEA-QVVVLAAQRTEA----SHVLDE------LKTARDQAKRDLDFTVVRAPIDGVVG 279
           A A+A ++  + +Q+  A    +  +D        K   +QAK DL+ TV+RAPI G+V 
Sbjct: 206 AQAQATKLSTIGSQKANAALTDNTTVDSNPEVLLAKARYEQAKIDLERTVIRAPISGIVA 265

Query: 280 NRAAQVGQLVQTGTRLVAVVPLESVYVDANFKETQLGRLKPGQSVNVYVDAYPDH-DFAG 338
            R  QVG+ VQ G  L+ VVP + +YVDANFKE +L  +K GQ V +  D Y D   + G
Sbjct: 266 KRQVQVGRRVQVGMPLMTVVPTDHIYVDANFKEVELRDVKVGQPVTLTADLYGDDVTYHG 325

Query: 339 KVVSVSPASGSVFSLLPPENATGNFTKIVQRIPVRIAIDPNVLAKHELRPGMSVTATVDT 398
            V   S  +GS FS++P +NATGN+ K+VQR+P+RI +DP  L  + L+ G+S+ AT+DT
Sbjct: 326 VVAGFSGGTGSAFSMIPAQNATGNWIKVVQRLPIRIELDPKDLQAYPLQVGLSMVATIDT 385