Pairwise Alignments

Query, 167 a.a., putative RNA polymerase sigma factor FecI from Xanthobacter sp. DMC5

Subject, 159 a.a., RNA polymerase sigma factor FECI protein from Sinorhizobium meliloti 1021

 Score = 75.5 bits (184), Expect = 4e-19
 Identities = 53/165 (32%), Positives = 83/165 (50%), Gaps = 14/165 (8%)

Query: 8   LFLRHAREINRFLRRRGHSAETAADLTQDTFVRLLAAAPRGNGDN---PSAYLHQVARNL 64
           ++LRH R +  +      S + A D+ QD ++R +    R   D    P  YL ++ RNL
Sbjct: 1   MYLRHRRSLIDYAAPLLGSKDDAEDIVQDAYLRFV----RETADEHMPPKTYLFRIVRNL 56

Query: 65  SVDLYRRERL----VEFVDLPATDFQGLADFAPGPEAVTYDRQRLAIVARALSELPEQTR 120
           S +   R +L    VE  D+P   +  L      PEA     +    VA+AL  LP++ R
Sbjct: 57  SFNKRSRRKLENNVVESADIP---WWALPQAVETPEAQFLMSEAADRVAQALGALPDRMR 113

Query: 121 TAFEMHRLGERTMQEIATDLHLSVSRTWALIRRAYLHLRASLNDD 165
            AFE++R    T+++IA +L +S+     L+R A  HL+A L+ D
Sbjct: 114 RAFELYRFEGSTLKDIAEELSISIPTAHRLVRDAMEHLKAGLDHD 158