Pairwise Alignments

Query, 167 a.a., putative RNA polymerase sigma factor FecI from Xanthobacter sp. DMC5

Subject, 165 a.a., sigma-70 family RNA polymerase sigma factor from Pseudomonas fluorescens SBW25-INTG

 Score = 66.2 bits (160), Expect = 3e-16
 Identities = 49/158 (31%), Positives = 76/158 (48%), Gaps = 13/158 (8%)

Query: 5   LQRLFLRHAREINRFLRRRGHSAETAADLTQDTFVRLLAAA-PRGNGDNPSAYLHQVARN 63
           ++ L+  H   + R+L R+  +A  AADL  DTF+RLL      G G  P A L  +A+ 
Sbjct: 9   VEALYCEHHGWLYRWLDRKLGNASDAADLAHDTFMRLLTRQHSAGFGSEPRALLTHIAKG 68

Query: 64  LSVDLYRRER-----LVEFVDLPATDFQGLADFAPGPEAVTYDRQRLAIVARALSELPEQ 118
           L +D +RR+      L     LP  +        P PE      + L  +   L +LP++
Sbjct: 69  LMIDSWRRQEVERAYLETIAHLPEQE-------VPSPETRWLILEALYRIEAMLRDLPDK 121

Query: 119 TRTAFEMHRLGERTMQEIATDLHLSVSRTWALIRRAYL 156
           TR AF M ++   T  +IA +L +S+      +R A+L
Sbjct: 122 TRQAFLMSQIDGLTYAQIAEELKVSLVSVKRYMRDAFL 159