Pairwise Alignments

Query, 402 a.a., hypothetical protein from Xanthobacter sp. DMC5

Subject, 230 a.a., site-specific DNA-methyltransferase from Vibrio cholerae E7946 ATCC 55056

 Score = 52.4 bits (124), Expect = 1e-11
 Identities = 54/236 (22%), Positives = 92/236 (38%), Gaps = 36/236 (15%)

Query: 44  LNEILIGDTIARMAALPAGSVDLVFADPPYN----LQLGGELKRPDESRVDAVDDHWDQF 99
           +++I   D +  +  L   SVDL   DPPY      +  G   R  ES+  + +  +  F
Sbjct: 14  MSKIYQMDAVDWLKTLENCSVDLFITDPPYESLEKYRQIGTTTRLKESKSSS-NQWFSVF 72

Query: 100 ESFAAYDAFTRAWLLAARRALKPNGTLFVIGSYHNIFRVGALMQDLGFWILNDIIWRKAN 159
            +    + F   +     R LK     ++      +F    + + +GF     I+W K  
Sbjct: 73  PNTRFEELFREVY-----RVLKKGSHFYLFCDQETMFLAKPIAESVGFKFWKPIVWDKC- 126

Query: 160 PMPNFRGRRFTNAHETLIWAARSADSKYTFNYEALKAGNEDVQVRSDWLFPLCTGQERLK 219
                               A      Y   YE +    +  +  +D   P     + L+
Sbjct: 127 --------------------AIGMGYHYRARYEFILFFEKGKRKLNDLSVP-----DVLE 161

Query: 220 DEKGRKLHPTQKPEALLARVLLSSTKPGDVVLDPFFGSGTTGAVAKRLRRSFIGIE 275
            ++  K +PT+KP  LL  ++  S+   ++V D FFGSG+T   A  L R +IG +
Sbjct: 162 YKRVWKGYPTEKPVELLEVLIRQSSSENEIVADSFFGSGSTLIAANNLSRKYIGCD 217