Pairwise Alignments

Query, 365 a.a., HTH-type transcriptional regulator DegA from Xanthobacter sp. DMC5

Subject, 335 a.a., DNA-binding transcriptional regulator CytR from Vibrio cholerae E7946 ATCC 55056

 Score =  155 bits (392), Expect = 1e-42
 Identities = 113/335 (33%), Positives = 167/335 (49%), Gaps = 9/335 (2%)

Query: 27  TLQGLARELGLSTATISLALRDSPMVAEATRLKVQEAARARGYVANRGAAALRTARTNIV 86
           T++ +A+  G+STAT+S AL +   V+ +TR +V+EA    GY  N  A  LR   +  +
Sbjct: 3   TMKDVAQLAGVSTATVSRALMNPEKVSSSTRKRVEEAVLEAGYSPNSLARNLRRNESKTI 62

Query: 87  ALGLHDIVNPSFTELLAAVEDALSEAGKTVLLGVSQEDVARQTRTLGTLAEYRPDAFLVS 146
              + DI +P F+E++  +EDA  E G  VLLG S +   R+   +  +   + D  L+ 
Sbjct: 63  VAIVPDICDPYFSEIIRGIEDAAMEHGYLVLLGDSGQQKRRENSFVNLVFTKQADGMLLL 122

Query: 147 ----PAAHSRVEDLKALASTGIAVVQVTREIEGSGFDFAGSDDVTGVALGVAHLVALGHR 202
               P   S+ E  K L    +A  +   E+E         D++T     V +L  LGH+
Sbjct: 123 GTDLPFDVSKPEQ-KNLPPMVMAC-EFAPELE---LPTVHIDNLTSAFEAVNYLTQLGHK 177

Query: 203 RIGMIGGFGAISTGRKRFAGYKAGLAAAGIPLDPTLVMEGPGLRAEGRKAMARLLALDEP 262
           RI  I G    +  + R  GY+  L  AGI ++PT    G      G KA+ +LLAL E 
Sbjct: 178 RIAQISGPQHAALCQFRHQGYQQALRRAGITMNPTYCTFGDFTFEAGAKAVRQLLALPEQ 237

Query: 263 PTAAVCFNDLSAFGALMELQAAGLTAGRDFSLVGYDDIEEARVWHPPLTTVHTFIPEYGR 322
           PTA  C ND  A GA+ E +  GL   +D S+VG+DDI+ A+   PPLTT+     E GR
Sbjct: 238 PTAIFCHNDTMAIGAIQEAKRLGLRVPQDLSVVGFDDIQFAQYCDPPLTTISQPRYEIGR 297

Query: 323 AAATLALKRIADPGRPVERAVMTPQLVVRASTCAP 357
            A  + L+ +          ++  +LVVR S   P
Sbjct: 298 QAMLMMLELLRGHDVRAGSRLLETKLVVRESAAPP 332