Pairwise Alignments

Query, 268 a.a., 23S rRNA (guanosine-2'-O-)-methyltransferase RlmB from Xanthobacter sp. DMC5

Subject, 247 a.a., 23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB from Vibrio cholerae E7946 ATCC 55056

 Score = 57.4 bits (137), Expect = 3e-13
 Identities = 50/170 (29%), Positives = 77/170 (45%), Gaps = 5/170 (2%)

Query: 97  HRGILA-LGAARPLPEAGTLLDGLGP--RALVVAALGLTNHDNMGGIFRNAAAFGADAVI 153
           H+G++A +  AR L E   L D L    + L++   G+T+  N+G   RNA A G  AVI
Sbjct: 68  HQGLIARVKPARQLNE-NDLDDILAQHEQPLLLVLDGVTDPHNLGACLRNADAAGVAAVI 126

Query: 154 LDEASCDPLYRKAIRVSVGASLVVPFARVPDAGVLIALLAARGFEAVALSPSGRETLSRL 213
           + +    PL     +V+ GA+  VP  RV +    +  L  +G   V  +      + + 
Sbjct: 127 VPKDKSAPLTATVSKVACGAAETVPLVRVTNLARTMRALQEKGVWFVGTAGEATHDIYQS 186

Query: 214 TRPPRVAALFGTEGPGLPDAVMARV-RTVAIPMAEGFDSLNVATTSGIVL 262
                +A + G EG G+           + IPMA    SLNV+   G+ L
Sbjct: 187 KLTGSLAIVMGAEGDGMRRLTRETCDDLIKIPMAGSVSSLNVSVACGVCL 236