Pairwise Alignments

Query, 485 a.a., NAD(P)H-quinone oxidoreductase subunit 2, chloroplastic from Xanthobacter sp. DMC5

Subject, 1265 a.a., NADH dehydrogenase (quinone) (NCBI) from Rhodospirillum rubrum S1H

 Score =  171 bits (433), Expect = 1e-46
 Identities = 128/438 (29%), Positives = 214/438 (48%), Gaps = 37/438 (8%)

Query: 41  AACGLTFALALLLLGAPRIQGPFLIVDDLNIVFVVLNTFVAFTTAWFSAGYIAHELETGR 100
           A   +  A A L L A R++       DL  +F ++   +      +S GY+ H     R
Sbjct: 255 AVGAIALATATLALVAARLES-----GDLGGLFALIFAAIGLAVTVYSVGYMKHGHGVNR 309

Query: 101 LTPLNLRFYHAMYQVLLGAMTLALLSNNLGVMWVAIEVATLTTVLMVGLYRTEAAIEAAW 160
                   Y     +++G++     +N+LG  ++  E+ T  + L+V   +T  A++A  
Sbjct: 310 --------YFFFLFLMIGSLIGVATTNHLGNFYLFWELMTWMSYLLVIHEQTAKALKAGM 361

Query: 161 KYFMLGSVGIALALFGTILVYMVAQPVVGEGTDGMIWSVLMKHAREFDPALLNVAFVFLL 220
           KYF++ + G  +  FG ++++         GT  +  S +        PAL  V     L
Sbjct: 362 KYFLICASGAYVMHFGILVLHAQL------GTFEI--SEIAPCIGTLSPALAGVVLATFL 413

Query: 221 LGYGTKVGLAPLHAWLPDAHSEGPTPISAVLSGLLLNVALFAVLRFK---------SLLA 271
           +G+  K GL PL++WLP+AH   P+ IS  +SG+L    +  +++               
Sbjct: 414 IGFMAKAGLFPLYSWLPEAHPVAPSSISGPMSGILTKAGILGMVKLLFGIFGVGALGQFG 473

Query: 272 AHPGTLAPGPLMMAMGLGSLLLAGFMLYRRRDIKRLFAYSSIEHMGIIAFAFGLGGPLAN 331
              G   PG +++A+G  +LLL     YR+ DIKRL AYS++  +G I    G+G  LA 
Sbjct: 474 LFAGLSLPGAVLVALGGITLLLGEVQAYRQTDIKRLLAYSTLAQIGEITMVLGVGTSLAL 533

Query: 332 FAGLLHMTMHSLTKSAIFFAVGHACQVKGTQELAKIRGLTTSHPLLGWSLVAGVVAIAGL 391
             GL H+T H++ K+ +FFAVG        + L  ++GL    P  G  L  G++AI G+
Sbjct: 534 AGGLFHVTNHAVMKTMLFFAVGALILRSAGRSLDDLKGLGKVMPFTGLCLGIGLLAIMGV 593

Query: 392 PPAGVFMSEFLVVTSAF-AARPWLALILVLGLLIAFGAL-MVKLSAIAFGEPSPGTDPVK 449
           PP G F+S+FL++ +   A +  +A ++++G +I  GAL   ++    F EP  G   V+
Sbjct: 594 PPFGGFVSKFLMIYACVEAGQVGVAAVILVGSVI--GALYYARVLRAVFFEPYTGPKVVE 651

Query: 450 ASYVPMGVHLALVFAAGL 467
           A   P+ + +AL   AG+
Sbjct: 652 A---PLTMRIALGALAGV 666



 Score =  115 bits (289), Expect = 7e-30
 Identities = 122/481 (25%), Positives = 201/481 (41%), Gaps = 36/481 (7%)

Query: 20   AASAVLLALVPSYRVGAFLNVAACGLTFALALLLLGAPRIQGPFLIVDDLNIVFVVLNTF 79
            AA   ++  V  Y +G    V A  L+ A+  L L    IQ      D L+  F  L   
Sbjct: 709  AALIAVVGAVVVYILGKRSTVVAGSLSVAVMALALAGILIQSGRY--DLLSFWFAALIVV 766

Query: 80   VAFTTAWFSAGYIAHELETGRLTPLNLRFYHAMYQVLLGAMTLALLSNNLGVMWVAIEVA 139
            V      +S GY+AH     R        +   + +++G +     S++L   +   EV 
Sbjct: 767  VGAINLLYSIGYMAHGHAQNR--------FFFFFVMMIGGLLGVTASDDLFNFFAFWEVM 818

Query: 140  TLTTVLMVGLYR-TEAAIEAAWKYFMLGSVGIALALFGTILVYMVAQPVVGEGTDGMIWS 198
            +  T+ +V ++  T+ +++   KYF+   VG +    G  ++   A      GT  M  +
Sbjct: 819  SSWTLYLVIIHEETKDSLDEGTKYFIFNFVGASFLFLGVAILAAKA------GTFEM--A 870

Query: 199  VLMKHAREFDPALLNVAFVFLLLGYGTKVGLAPLHAWLPDAHSEGPTPISAVLSGLLLNV 258
            +L + A       L V+   +L G   K    PL        +  PTP+S  +S +LL V
Sbjct: 871  LLPQAALSMPVGWLAVSAGLILAGLLMKAAQLPLRIDYQMHPAPAPTPVSGYISAVLLKV 930

Query: 259  ALFAVLRFKSLLAAHPGTLA--------PGPLMMAMGLGSL--LLAGFMLYRRRDIKRLF 308
              + VL+    L A  G           P PL++   + +L  L AG M   +  +KRL 
Sbjct: 931  GPYGVLKIMVALGAGGGLARIAGLGAWMPDPLVVVQVIAALTVLYAGAMAVVQNGVKRLL 990

Query: 309  AYSSIEHMGIIAFAFGLGGPLANFAGLLHMTMHSLTKSAIFFAVGHACQVKGTQELAKIR 368
             YS++  +G +     LG  L    GL+H   H + K  +F A G          L  + 
Sbjct: 991  IYSTVSQLGYVLLGLSLGSALGVAGGLMHFVNHMMLKDILFLAAGCILAQAHVHSLDDLG 1050

Query: 369  GLTTSHPL-LGWSLVAGVVAIAGLPPAGVFMSEFLVVTSAFAARPW-LALILVLGLLIAF 426
            GL    P+  G  L AG ++++G+PP   F S++L+   AF    + LA+  ++  L   
Sbjct: 1051 GLGRKMPITFGLFLFAG-LSLSGIPPFNGFASKWLIYQGAFQGGHYLLAMAALMSSLFTL 1109

Query: 427  GALMVKLSAIAFGEPSPGTDPVKAS----YVPMGVHLALVFAAGLYLPPELVAWFRHVAA 482
             A++    +   G  SP    ++ +     +PMG+  A     G++    LV   R  AA
Sbjct: 1110 AAVLKFTHSAFLGPLSPAAATMREAPPVMLIPMGLLAAGSVIVGVFPGVALVPISRIQAA 1169

Query: 483  V 483
            +
Sbjct: 1170 L 1170



 Score = 57.0 bits (136), Expect = 4e-12
 Identities = 42/180 (23%), Positives = 79/180 (43%), Gaps = 8/180 (4%)

Query: 291 LLLAGFMLYRRRDIKRLFAYSSIEHMGIIAFAFGLGGPLANFAGLLHMTMHSLTKSAIFF 350
           L+  G  L   RD+ R+  YS+I  +G +    G+G        ++H+   ++ ++ +  
Sbjct: 16  LIGEGLALRNVRDLARMLTYSTIAEIGYVLMGLGIGTAAGETGAVMHLGYQAIMRALVVV 75

Query: 351 AVGHACQVKGTQELAKIRGLTTSHPLLGWSLVAGVVAIAGLPPAGVFMSEFLVVTSAFAA 410
           A  H  +  G+ +L  + G     P +      G+ ++ GL P     S+F+++ +A   
Sbjct: 76  AAWHLIRRSGSSKLDALVGSVERMPFVSLMFGFGLFSVMGLSPFKGSFSKFVILYAAIEN 135

Query: 411 RPW-LALILVLGLLIAFGALMVKLSAIAFGEPSP---GTDPVKASYVPMG----VHLALV 462
             W LA +  +  +IA    +  +  + F   S    G  P+    +P+G    V LALV
Sbjct: 136 GYWGLAAVGTVASIIAAFYYIHTIQQVCFQRQSHGILGDKPIPFFQIPVGQLPIVVLALV 195