Pairwise Alignments
Query, 485 a.a., NAD(P)H-quinone oxidoreductase subunit 2, chloroplastic from Xanthobacter sp. DMC5
Subject, 1253 a.a., hydrogenase, CooM subunit, putative (TIGR) from Desulfovibrio vulgaris Hildenborough JW710
Score = 145 bits (367), Expect = 6e-39
Identities = 115/413 (27%), Positives = 187/413 (45%), Gaps = 33/413 (7%)
Query: 66 VDDLNIVFVVLNTFVAFTTAWFSAGYIAHELETGRLTPLNLRFYHAMYQVLLGAMTLALL 125
+D L +F V+ V +S GYI H + Y+ ++ G++ +
Sbjct: 274 LDPLARLFAVITGGVCLAVTAYSVGYITHARHSSG--------YYFFLMIMTGSLMGLVS 325
Query: 126 SNNLGVMWVAIEVATLTTVLMVGLYRTEAAIEAAWKYFMLGSVGIALALFGTILVYMVAQ 185
+ + G + E+ T ++ +V T A A KYF++ + G L G +++
Sbjct: 326 TRSFGSFYGFWELMTWSSYFLVVHEGTPRAFRAGVKYFVMCAAGAMFMLPGLLML----- 380
Query: 186 PVVGEGTDGMIWSVLMKHAREFDPALLNVAFVFLLLGYGTKVGLAPLHAWLPDAHSEGPT 245
G D + + R+ DP LL A + L G+ K G P+H WLPDAH P+
Sbjct: 381 -TNGGSAD---FDAVTTAVRQLDPMLLKAALLLTLAGFAVKAGFVPVHGWLPDAHPVAPS 436
Query: 246 PISAVLSGLLLNV-------ALFAVLRFKSLLAAHPGTLA---PGPLMMAMGLGSLLLAG 295
IS LSGLL LFA+ LL G G + +G+ ++
Sbjct: 437 SISGPLSGLLTKTGIYGIVRVLFAICGMTVLLQTGEGIAGISWMGAAVTTLGVLTMAYGE 496
Query: 296 FMLYRRRDIKRLFAYSSIEHMGIIAFAFGLGGPLANFAGLLHMTMHSLTKSAIFFAVGHA 355
M R+ DIKRL AYS++ +G IA GLG L+ L H+ H++ K+ +F G A
Sbjct: 497 VMALRQDDIKRLLAYSTMGQIGEIATIIGLGTWLSTTGALAHVLNHAIMKNLLFLCAG-A 555
Query: 356 CQVKGTQELAKIRGLTTSHPLLGWSLVAGVVAIAGLPPAGVFMSEFLVVTSAF-AARPWL 414
++ ++L + G+ P ++ GV++I G+PP F S++L++ A A P L
Sbjct: 556 LVMRAGRKLEDLAGMGRMMPWTAGCMMVGVLSIMGMPPFAGFASKYLMLQGAVQAGHPEL 615
Query: 415 ALILVLGLLIAFGALMVKLSAIAFGEPSPGTDPVKASYVPMGVHLALVFAAGL 467
A L+L L A +++ + P G PV+ + P + L ++ AGL
Sbjct: 616 AAALLLASL-AGAVYYMRIIRVLVFMPRKG-HPVQEA--PWAMRLPMLVLAGL 664
Score = 104 bits (259), Expect = 2e-26
Identities = 99/437 (22%), Positives = 179/437 (40%), Gaps = 36/437 (8%)
Query: 66 VDDLNIVFVVLNTFVAFTTAWFSAGYIAHELETGRLTPLNLRFYHAMYQVLLGAMTLALL 125
+D L+ FV+ + ++ GY+ H R ++ + ++G +
Sbjct: 750 LDMLSYGFVLTVAVIGCLNMVYAVGYMEHSHTQWR--------FYTFFLFMVGGLMGVAA 801
Query: 126 SNNLGVMWVAIEVATLTTVLMVGLYRT-EAAIEAAWKYFMLGSVGIALALFGTILVYMVA 184
S +L + E+ + ++ V ++ A+ +KYF +G A G +L+ A
Sbjct: 802 SRDLYSFFTFWEIMSSWSLYCVIVHEEFPEALREGFKYFFFNVLGAAFMFLGVVLLTAGA 861
Query: 185 QPVVGEGTDGMIWSVLMKHAREFDPALLNVAFVFLLLGYGTKVGLAPLHAWLPDAHSEGP 244
+ + S+ + L A ++LG K P + + P
Sbjct: 862 GSPAFDAVHAALPSMPV--------GLSATAVGLMVLGLVMKAAQLPFRIDVQMHPATAP 913
Query: 245 TPISAVLSGLLLNVALFAVLRFKSLLAAHPGTLAPGPLMMAMGLG-----------SLLL 293
TP+S +S +LL ALF + K LLA G + G+G ++++
Sbjct: 914 TPVSGYISSVLLKSALFGLA--KLLLALGGGAVLVQAAGFTDGIGLMQVVAWVGGITIVM 971
Query: 294 AGFMLYRRRDIKRLFAYSSIEHMGIIAFAFGLGGPLANFAGLLHMTMHSLTKSAIFFAVG 353
A + + D+K + YS++ +G + AF LG PL GLLH+ H L K +F G
Sbjct: 972 AALLAVLQSDLKLVLIYSTVSQLGYMVLAFALGTPLGMAGGLLHLANHVLFKDLLFLVAG 1031
Query: 354 HACQVKGTQELAKIRGLTTSHPLLGWSLVAGVVAIAGLPPAGVFMSEFLVVTSAF-AARP 412
L ++ G+ P+ G +++ G+PP F S++++ +
Sbjct: 1032 ALILQTHKHSLDQLGGIGRKMPVTLGVFAIGALSVVGVPPTNGFTSKWIIYHALMQQGEV 1091
Query: 413 WLALILVLGLLIAFGALMVKLSAIAFGEPSPGTDPVKASYVPMGVHLALVFAAGL----Y 468
LA++ ++G ++ L A G+PSP D V+ + M V + LV AAG +
Sbjct: 1092 MLAILSLVGSVLTLAYFAKYLHAAFLGQPSPDIDHVQEAPRVMLVPM-LVLAAGCVVTGF 1150
Query: 469 LPPELVAWFRHVAAVLG 485
P L+A + LG
Sbjct: 1151 FPGLLLAPIATMLTALG 1167
Score = 46.2 bits (108), Expect = 7e-09
Identities = 53/196 (27%), Positives = 81/196 (41%), Gaps = 12/196 (6%)
Query: 276 TLAPGPLMMAMGLGSLLLAGFM--LYRRRDIKRLFAYSSIEHMGIIAFAFGLGGPLANFA 333
TL P M+ G+ LL G + + RR + L Y ++ GI FGLG A
Sbjct: 6 TLFDLPFMVQAGI-VLLFWGTLAAIAARRRLDALIGYGAVADAGIALIGFGLGSATATTG 64
Query: 334 GLLHMTMHSLTKSAIFFAVGHACQVKGTQELAKIRGLTTSHPLLGWSLVAGVVAIAGLPP 393
G+L L + + A+ G+ E +RG+ + P G+ A G+ P
Sbjct: 65 GILFAAFQCLARLLAYGALRPLMSKAGSAEADALRGIREAMPASAVLYGFGMFAALGISP 124
Query: 394 AGVFMSEFLVVTSAFAARPWLALILVLGLLIAF-GALMVKLSAIAFGEPSPGTDPVKASY 452
V LV +A + L+L LL+A A+M L+ +A P +AS
Sbjct: 125 FLVPEGRMLVTAAAVQSGG-----LLLPLLMALSAAIMAWLTVVATQTVCLEHGPWEASG 179
Query: 453 VP---MGVHLALVFAA 465
+ + +HLA V A
Sbjct: 180 ITPERLPLHLAPVALA 195