Pairwise Alignments

Query, 1172 a.a., RecBCD enzyme subunit RecB from Xanthobacter sp. DMC5

Subject, 1138 a.a., putative UvrD/REP helicase from Phaeobacter inhibens DSM 17395

 Score = 64.3 bits (155), Expect = 5e-14
 Identities = 50/176 (28%), Positives = 84/176 (47%), Gaps = 23/176 (13%)

Query: 363 YEAEKAARGLLDFDDLITKAAALLAEQPTFVQFKLDQGIDHILVDEAQDTSPEQWKVVEG 422
           YE  KA RG +DF DL+ +  AL+ E    V+ +L    DH+LVDE QD +    +++  
Sbjct: 385 YEQLKAERGAVDFGDLVARPTALI-ESDRAVRTELQGRYDHVLVDEYQDVNRASVRLLRA 443

Query: 423 LTSDFFSGEGARAGVTRTIFVVGDEKQSIFSFQGADPRAFGAMRSTFERKVGAEGFRRVE 482
           L  D            + ++VVGD KQSI+ F+GA   ++   R   E      G + ++
Sbjct: 444 LKPD-----------GKNLWVVGDAKQSIYRFRGAS--SYNIDRFETE---DFPGGKSLQ 487

Query: 483 LPHSFRSAPGVLEAVDAIFKSEVAHAGLTLD------GVGPVHAAIRADAPALVEI 532
           L  ++RS+  + +   A   + +A +G   +      GV P   ++ +    + EI
Sbjct: 488 LSMNYRSSQEICDTFSAFATTRMAASGFQANAFKGKSGVSPSFVSVESKDHEIEEI 543



 Score = 45.4 bits (106), Expect = 3e-08
 Identities = 34/90 (37%), Positives = 45/90 (50%), Gaps = 8/90 (8%)

Query: 783 DEVRVMTAHGAKGLEAPLVILADTVDMPRPRIAGGLLTLPGEGVPVLAPRKAEDPEVLAA 842
           D VR+MT HG+KGLE  ++ L        PR A     LP     +  P       V   
Sbjct: 764 DAVRLMTIHGSKGLEFKVLHLPSLTSGSIPRSAKQSRGLPPPDGMIEGP-------VFRG 816

Query: 843 ARATAAARELEEYRRLFYVALTRAEDALVI 872
           + A  A  + EE R LF+VAL+RAED+L +
Sbjct: 817 SDAVDAGHD-EEQRCLFFVALSRAEDSLFL 845



 Score = 39.3 bits (90), Expect = 2e-06
 Identities = 26/79 (32%), Positives = 36/79 (45%), Gaps = 3/79 (3%)

Query: 2   SSPD---LARDPKSEATRRQSEASHPAVSAWVSANAGSGKTHVLARRVIRLLLAGTPPGR 58
           S PD   LA  PK     ++  A H   +  + A  G+GKT  L  R+  L      P  
Sbjct: 184 SEPDEYALASPPKPLNEEQRHAAEHDGNALLLKAGPGTGKTQTLVGRLSVLKDRSVDPES 243

Query: 59  ILCLTYTKAAAANMANRVL 77
           IL LT++  AA  M +R +
Sbjct: 244 ILLLTFSNKAAGEMTDRAM 262