Pairwise Alignments

Query, 1172 a.a., RecBCD enzyme subunit RecB from Xanthobacter sp. DMC5

Subject, 1181 a.a., exodeoxyribonuclease V subunit beta from Klebsiella michiganensis M5al

 Score = 97.8 bits (242), Expect = 5e-24
 Identities = 149/570 (26%), Positives = 236/570 (41%), Gaps = 71/570 (12%)

Query: 366 EKAARGLLDFDDLITKAA-ALLAEQPTFVQFKLDQGIDHILVDEAQDTSPEQWKVVEGLT 424
           EK  RG L FDD++++   AL  E    +   + Q     ++DE QDT P+Q+++   + 
Sbjct: 342 EKRRRGELGFDDMLSRLDDALRGESGEALASAIRQRFPVAMIDEFQDTDPQQYRIFRRIW 401

Query: 425 SDFFSGEGARAGVTRTIFVVGDEKQSIFSFQGADPRAFGAMRSTFERKVGAEGFRRVELP 484
                    R      + ++GD KQ+I++F+GAD   +         K   +      L 
Sbjct: 402 ---------RRQADTALLLIGDPKQAIYAFRGADIFTY--------MKARGDVTAHYTLD 444

Query: 485 HSFRSAPGVLEAVDAIFKSEVAHAGLTLDGVGPVHAAIRADAPALVEIWPTTVPEPHPEP 544
            ++RSAPG++++V+ +F               PV +A +           T      P  
Sbjct: 445 TNWRSAPGMVDSVNRLFSLSDNPFMFREIPFMPVKSADKNQGLRF-----TVDDAAIPAM 499

Query: 545 DNWRRPLDEVPSDDPVSRLA----ARIAGFIQAGI-ANGLAIPSRNGRPMRAGDVLVLVR 599
           + W    + V + D  + +A    A+I  ++ AG     L        P+RA D+ VLVR
Sbjct: 500 NIWLMSGEAVGAGDYQTFMAQLCAAQIRDWLSAGQQGKALLWRGEKAEPVRASDITVLVR 559

Query: 600 RRGRVFEAVIR-ALKELKDPRVQVAGADRLVVPEHIAALDLMALGDALLSPHDDLSLASV 658
            R     ++IR AL+ L  P V ++  D +   E   A +L+ L  A+L+P  + +L S 
Sbjct: 560 NRQEA--SLIRDALQLLSIPSVYLSNRDSVF--ETPEAQELLWLLQAVLAPERENTLRSA 615

Query: 659 LKSPLFGFTDDDLMALCPQRKGTLASVLATSDDTRHRAAAARLAGWKGEAEGLRPFDFYG 718
           L + +FG    D+  L    +     V    + +R+R    +L   +G    LR      
Sbjct: 616 LATSMFGLNALDIENLNHDERAWDELV---EEFSRYR----QLWRQRGVMPMLRALMSAR 668

Query: 719 RV----LGRDGGRRAM-----LARLGPEAADVLDEFMALARTYEGAEPASLAGFLAFLRR 769
           R+    L  +GG R +     ++ L  EAA+ L+   AL R         LA  +A    
Sbjct: 669 RIAENLLATNGGERRLTDILHISELLQEAANQLESEHALVRW--------LAQHIAEPDS 720

Query: 770 GGAETKRDMESGRDEVRVMTAHGAKGLEAPLVILADTVDMPRPRIAGGLLTLPGEGVPVL 829
             +  +  +ES +  V+++T H +KGLE PLV L       +   A            VL
Sbjct: 721 NASSQQMRLESDKHLVQIVTIHKSKGLEYPLVWLPFIARFRKQDQA--FYHDRSSFAAVL 778

Query: 830 APRKAEDPEVLAAARATAAARELEEYRRLFYVALTRAEDALVICGAETRAPARDKPHARP 889
              + E       + A A A  L E  RL YVALTRA     +  A       DKP A  
Sbjct: 779 DLGQDE------GSMALAEAERLAEDLRLLYVALTRAVWHCSLGVAPLSTRRSDKPGAS- 831

Query: 890 EGCWYDLARAALEPDADEGEPLGFEGKVLR 919
                D   +AL     +GE +   G + R
Sbjct: 832 -----DFHHSALGRLLQDGEAMDAAGLMAR 856



 Score = 38.5 bits (88), Expect = 3e-06
 Identities = 35/146 (23%), Positives = 65/146 (44%), Gaps = 14/146 (9%)

Query: 30  VSANAGSGKTHVLARRVIRLLLA---------GTPPGRILCLTYTKAAAANMANRVLAIL 80
           + A+AG+GKT  +A   +RLLL                +L +T+T+AA   +  R+ + +
Sbjct: 21  IEASAGTGKTFTIAALYLRLLLGLGGESAFPRQVSVEELLVVTFTEAATEELRGRIRSNI 80

Query: 81  G--RWARMDDAVLDAAIAETVGEAPDDALRARARRLFAAALETPGGLKIQTIHAFCGGLL 138
              R A + D+  ++  A  + E  D    A+   L    ++      + TIH FC  +L
Sbjct: 81  HELRIACLRDSADNSLYAGLLAEIADKTQAAQTLLLAERQMDEAA---VFTIHGFCQRML 137

Query: 139 HRFPFEADVAAGFRELDEVARRELMA 164
               FE+ +    + +++ +R    A
Sbjct: 138 SLNAFESGMLFEQQLIEDESRLRYQA 163