Pairwise Alignments

Query, 245 a.a., tRNA pseudouridine synthase A from Xanthobacter sp. DMC5

Subject, 247 a.a., tRNA pseudouridine synthase A from Sinorhizobium meliloti 1021

 Score =  286 bits (733), Expect = 2e-82
 Identities = 137/247 (55%), Positives = 181/247 (73%), Gaps = 2/247 (0%)

Query: 1   MPRYKLTIEYDGTPFAGWQMQADLPTVQGVLAEAFQRFCGEKVTVAGAGRTDAGVHATGQ 60
           MPRY+LT+EYDG+ + GWQ Q + P+VQG + +A      E V++ GAGRTD+GVHA GQ
Sbjct: 1   MPRYRLTVEYDGSDYVGWQRQDNGPSVQGAIEKAVLSLTRETVSIRGAGRTDSGVHARGQ 60

Query: 61  VAHVDLAKEWRTDTVRDAMTAQLR--PHPVAVLSAERVPDSFDARFSATKRHYLYRIVNR 118
           VAH+DL +EW++ T+++A+ A L      V++L     P  FDARFSA +RHYLYRI++R
Sbjct: 61  VAHLDLTREWKSYTLQNALNAHLALAGERVSILDVAEAPGDFDARFSAIRRHYLYRIISR 120

Query: 119 RPDLALDRDRAWRIPQKLDAEAMHAAAQRLLGKHDFSTFRAAECQAASPVKTLDQLDVSR 178
           R  LAL+  RAW +P+ LD +AMH AAQRL+G HDF+TFR+A CQA SP++TLD+LDV+R
Sbjct: 121 RSPLALEARRAWWVPKPLDHDAMHEAAQRLVGHHDFTTFRSAHCQATSPLRTLDRLDVTR 180

Query: 179 HGDEIRVVTSARSFLHHQVRSMVGSLMRVGEGRWSADDLAAALAAADRTRCGPMAPAAGL 238
            G+ I +  +A+SFLH+Q+RS  GSL  VGEG+W+ DDL AAL A DR  CGP+AP  GL
Sbjct: 181 AGELIEIRATAQSFLHNQIRSFAGSLKLVGEGKWTPDDLQAALEARDRKACGPVAPPDGL 240

Query: 239 YLAAVSY 245
           Y   V Y
Sbjct: 241 YFMRVDY 247