Pairwise Alignments

Query, 345 a.a., hypothetical protein from Xanthobacter sp. DMC5

Subject, 343 a.a., spermidine/putrescine ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

 Score = 62.0 bits (149), Expect = 2e-14
 Identities = 69/291 (23%), Positives = 122/291 (41%), Gaps = 26/291 (8%)

Query: 14  LALSVATAS----AEQITFVSQGGAYQEAQTKAILNPAAKLLGITINQ---DSAPDAWPV 66
           L LS   AS    AEQ   V   G Y   ++   L    +  G+TIN    ++    +  
Sbjct: 8   LVLSAVVASSQVYAEQTLNVYAWGGYLPEKS---LKAFEQQEGVTINYSTFENNESMYTK 64

Query: 67  LKTQAATGKPIWDVIDAPTTICVRGGDQGMVEKLDFSKIP-------TAASMPAQYKTPY 119
           LK    TG   +DV+ A      + G +G++ ++D ++IP       T   +    +  +
Sbjct: 65  LKLLKGTG---YDVVFASAYFIEKMGREGLLAEIDHNQIPNMKDAMPTVLGLAHDPQNKF 121

Query: 120 SVAYEFYSSVLAYNKKKFASKAPQTWADFWDVKAFPGTRALRNHPQATMEAALLADGVPA 179
           S+ Y +  + L YN     +   + WAD WD K +     L +  +     AL  +G   
Sbjct: 122 SLPYIWGITGLYYNSSTLPNGITK-WADLWD-KQYEQQVMLIDDIRDVFGMALKLNGFSI 179

Query: 180 DKLYPLDVDRAFKKLEQIKPHITVWWTSGAQSAQLLADGEVDMEMAWNGRVAAVMKEGAP 239
           +     ++ +A++ L  +K ++ ++  S A     ++ GE  + M WNG       E   
Sbjct: 180 NTKNEEEIKKAYESLVALKKNVLLY-NSDAPHVPYVS-GEATLGMQWNGNAYQGQVEMPE 237

Query: 240 VSFTFNQ--GLLQETSLCIVKGAPNLETAYKFVNAAMTPDIQANFPAYIDY 288
           + F   +   +L   +  I  G+ N+  A+KF+N    P+ QA     + Y
Sbjct: 238 LKFVMPEEGAVLWMDNFTIPSGSKNIPLAHKFINFMYQPENQAEIVQSLGY 288