Pairwise Alignments

Query, 345 a.a., hypothetical protein from Xanthobacter sp. DMC5

Subject, 345 a.a., spermidine/putrescine ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

 Score = 86.7 bits (213), Expect = 8e-22
 Identities = 78/337 (23%), Positives = 142/337 (42%), Gaps = 29/337 (8%)

Query: 12  AALALSVATASAEQITFVSQGGAYQEAQTKAILNPAAKLLGITI---NQDSAPDAWPVLK 68
           AAL  + A A  +++ F +    + E     +L    K  GI +     +S    +  LK
Sbjct: 13  AALFTTNAMAKDQELYFYN----WSEYIPSEVLEDFTKETGIKVIYSTYESNESMYAKLK 68

Query: 69  TQAATGKPIWDVIDAPTTICVRGGDQGMVEKLDFSKI-------PTAASMPAQYKTPYSV 121
           TQ A     +D++   T    +   +GM++++D SK+       P   + P      +S+
Sbjct: 69  TQGAG----YDLVVPSTYFVSKMRKEGMLQEIDHSKLSHFKDLDPNYLNKPFDPGNKFSI 124

Query: 122 AYEFYSSVLAYNKKKFASKAPQTWADFWDVKAFPGTRALRNHPQATMEAALLADGVPADK 181
            Y + ++ +  N      K+ + W D WD K + G   L +  +     AL   G   + 
Sbjct: 125 PYIWGATGIGINTDMLDKKSLKNWGDLWDAK-WAGQLMLMDDAREVFHIALSKLGYSPNT 183

Query: 182 LYPLDVDRAFKKLEQIKPHITVWWTSGAQSAQLLADGEVDMEMAWNGRVAAVMKEGAPVS 241
             P ++  A+++L+++ P++ V+ +    +  L   GEV + M WNG      +EGAP+ 
Sbjct: 184 TNPKEIKAAYRELKKLMPNVLVFNSDFPANPYLA--GEVSLGMLWNGSAYMARQEGAPIQ 241

Query: 242 FTFNQ--GLLQETSLCIVKGAPNLETAYKFVNAAMTPDIQANFPAYIDYGPGNPAAYATG 299
             + +   +    S+ I  GA N+E A+K ++  + P+  A     I Y    P   A  
Sbjct: 242 IIWPEKGTIFWMDSISIPAGAKNIEAAHKMIDFLLRPENAAKIALEIGY--PTPVKTAHD 299

Query: 300 KISPERATQMPSAPENAAKQVLVSQAWWASPAGEDAI 336
            +  E A      P     Q ++    W    GE ++
Sbjct: 300 LLPKEFAND----PSIYPPQSVIDNGEWQDEVGEASV 332