Pairwise Alignments

Query, 345 a.a., hypothetical protein from Xanthobacter sp. DMC5

Subject, 362 a.a., extracellular solute-binding protein from Rhodopseudomonas palustris CGA009

 Score =  219 bits (558), Expect = 9e-62
 Identities = 134/343 (39%), Positives = 183/343 (53%), Gaps = 20/343 (5%)

Query: 2   RFSVSIPVMTAALALSVATASAEQITFVSQ--GGAYQEAQTKAILNPAAKLLGITINQDS 59
           RF +      A +AL   TA+A+    + Q  GG Y +A  K + +P  K  GI +    
Sbjct: 6   RFRLPALASAAFIALGAGTAAAQSNVVIMQDPGGGYGDALRKVMYDPFEKETGIKVVTVQ 65

Query: 60  APDAWPVLKTQAATGKPIWD---VIDAPTTICVRGGDQGMVEKLDFSKIP-----TAASM 111
              + P +K QA  GK  WD   + D  T +    GD  + + +D+SK+      T A+M
Sbjct: 66  EARSGPRIKAQAEAGKAQWDLTFIFDQETKLL---GDCCLAD-IDYSKLSESAHKTLAAM 121

Query: 112 PAQYKTPYSVAYEFYSSVLAYNKKKF-ASKAPQTWADFWDVKAFPGTRALRNHPQATMEA 170
           P   K    VA +     L YNK KF   KAPQTWADFWDVK FPG R +   P+ T EA
Sbjct: 122 PDNLKRKKGVALQVIGVGLVYNKDKFKGDKAPQTWADFWDVKKFPGRRCMPAWPRFTFEA 181

Query: 171 ALLADGVPADKLYPLDVDRAFKKLEQIKPHITVWWTSGAQSAQLLADGEVDMEMAWNGRV 230
           AL+ADGV  DKLYP+D+DRA KKL++IKPH+  WWT+ AQ  QL+ DGE DM +A+ G +
Sbjct: 182 ALMADGVTKDKLYPIDMDRALKKLKEIKPHVVKWWTTAAQPPQLILDGEADMCLAYTGSM 241

Query: 231 AAVMKEGAPVSFTFNQGLLQETSLCIVKGAPNLETAYKFVNAAMTPDIQANFPAYIDYGP 290
           + +  EGAP+  TFNQG +      I KGAPN + A K ++  + P   A   +      
Sbjct: 242 SKLALEGAPIDLTFNQGFVYYDFFSIPKGAPNYDNALKLLSWRLDPKRAAQLTSTFPVAL 301

Query: 291 GNPAAY--ATGKISPERATQMPSAPENAAKQVLVSQAWWASPA 331
            +   +  AT K     A    + PEN AK +  S  +W +P+
Sbjct: 302 PSKVVFDAATDK---NIARYWANNPENVAKAIEWSPDFWGAPS 341