Pairwise Alignments

Query, 290 a.a., hypothetical protein from Xanthobacter sp. DMC5

Subject, 299 a.a., spermidine/putrescine ABC transporter permease from Sinorhizobium meliloti 1021

 Score =  153 bits (386), Expect = 5e-42
 Identities = 86/271 (31%), Positives = 142/271 (52%), Gaps = 7/271 (2%)

Query: 12  HKRQEQRLVLLLLAPSLAVVGCLLIVPLCWLVWQSVRQDGAFTLAHYARFFSDAVYWTTF 71
           H R E    L L  P+      + + P+  L+ +  R    ++++ Y+ F SD +  T F
Sbjct: 27  HNRAE---ALALALPAAVFAAVVFLAPVVILLAEGFRNADGWSVSAYSGFLSDPLNRTVF 83

Query: 72  LQTFRIAFIVTAVTVLLGYPIAYVAAGASRRWSIFILAMVILPFWTSVLVRAYAWLILLQ 131
           L+T R+   VT V  ++GY  A+       +    ++ +V+LP   S + R YAW+++L 
Sbjct: 84  LRTLRLGAAVTVVAAVIGYAAAFAIVNLPPKGKGRMIGLVVLPLMISPVARTYAWIVILG 143

Query: 132 RRGLVNSVLTDFGLIQNPLALVNNELGTVIATVHILLPFMVLPLYATMQKIPAELTMAGA 191
           R G+VN  LT  GL   P+  +  E    +  + + LP M+L L + ++ +P +   A  
Sbjct: 144 RTGIVNQALTSVGLTDEPVRFLFTETAVFVGLLQLFLPLMILALISALENMPKDAIPAAR 203

Query: 192 SLGGTPFYVFTRVFLPLSLPGVVAGMVLVFVLTLGFYITPELLGGGRTYMVSMLVSRNIE 251
            LG   F VF +V LPL+  G+V G  LVF  +L  YITP +LGG +  M+  L+ + + 
Sbjct: 204 VLGANWFQVFWKVILPLTREGLVIGGTLVFTGSLTAYITPAILGGSKVLMLETLLYQRVT 263

Query: 252 VYNEWGAASSISIVLLACVF----LVFRLAS 278
           V N++ +AS I+ +L+   F    L+ RLA+
Sbjct: 264 VANDFVSASVIAFILIVMSFAANLLLKRLAT 294