Pairwise Alignments

Query, 264 a.a., hypothetical protein from Xanthobacter sp. DMC5

Subject, 256 a.a., spermidine/putrescine ABC transporter permease PotC from Vibrio cholerae E7946 ATCC 55056

 Score =  115 bits (287), Expect = 1e-30
 Identities = 62/244 (25%), Positives = 136/244 (55%), Gaps = 1/244 (0%)

Query: 12  VGLILVWLMVPVLIIVPMSFSGARFLAFPPPSWSLRWYEAYLESAAWMQATRVSLILAVS 71
           + L+ ++L +P+++++  SF+  +F       ++ +WY A + + + MQA   S+ +AV 
Sbjct: 10  MSLVYLFLYLPIIVLIANSFNENKF-GIKWGGFTTKWYHALMNNDSLMQAAWHSINVAVF 68

Query: 72  SAIIATVLGTAAAYALNLSTSRLVRSLQVVLLLPLVVPIVITAVGVFLVYANVGLLATMS 131
           SA  AT++G+  A AL     +  + +  +L + ++ P ++ A+ +  ++  +G      
Sbjct: 69  SATAATLIGSLTAVALFRYQFKGKKVVSGMLFVVMMSPDIVMAISLLALFLVMGAKLGFF 128

Query: 132 GLILANVMLGLPFVIISVLTGLRKFDPAQEMVSRSLGMNRLRTFFIVTLPQIRPSVISGL 191
            L++A++   LPFV+++V T L  FD      ++ LG         + LP  +P+V +G 
Sbjct: 129 TLLIAHITFCLPFVVVTVYTRLNGFDVKMLEAAKDLGAGEWVILKKIILPLAKPAVAAGW 188

Query: 192 LFAFISALDETVVAIFISGGEYQTLTKRMFTALRDEIDPTIAAISTLLTAISFLMVILVS 251
           L +F  +LD+ +++ F++G  Y+ L  ++++ ++  I P + A++T++  +S ++V+   
Sbjct: 189 LLSFTLSLDDVIISSFVTGPTYEILPLKIYSMVKVGISPEVNALATVMLVVSLVLVVASQ 248

Query: 252 LSAR 255
           L AR
Sbjct: 249 LLAR 252