Pairwise Alignments

Query, 264 a.a., hypothetical protein from Xanthobacter sp. DMC5

Subject, 597 a.a., ABC transporter permease subunit from Rhodopseudomonas palustris CGA009

 Score =  152 bits (385), Expect = 1e-41
 Identities = 74/231 (32%), Positives = 136/231 (58%)

Query: 8   LRVAVGLILVWLMVPVLIIVPMSFSGARFLAFPPPSWSLRWYEAYLESAAWMQATRVSLI 67
           +RV  G+++  L++P+++++ +SFS A +L FPPP +SLRWYE +     WM+A   S +
Sbjct: 344 VRVMGGVVVAVLILPIVVVMVISFSSASYLTFPPPGFSLRWYEQFFSDTNWMRAFWTSAL 403

Query: 68  LAVSSAIIATVLGTAAAYALNLSTSRLVRSLQVVLLLPLVVPIVITAVGVFLVYANVGLL 127
           +A+ SA+IA  LGT AA  +     R   ++ ++L+ P++VP V+  + ++ ++    L+
Sbjct: 404 IALVSAVIAVGLGTCAALGIVRGDIRGKSAIMLLLVSPIIVPPVVLGLSLYTLFLKFDLI 463

Query: 128 ATMSGLILANVMLGLPFVIISVLTGLRKFDPAQEMVSRSLGMNRLRTFFIVTLPQIRPSV 187
            ++ GL  A+ + GLP V++ +   L+  D   E  +   G + L    +VTLP I P +
Sbjct: 464 GSVFGLAAAHAIGGLPIVVVILAAALQGVDKRLEQAAAVHGASSLTVLRLVTLPAIAPGL 523

Query: 188 ISGLLFAFISALDETVVAIFISGGEYQTLTKRMFTALRDEIDPTIAAISTL 238
            +   FAF+ + DE V+ +F+S  + +TL   ++  +   ++P +A +STL
Sbjct: 524 AAATFFAFLHSFDELVLTLFLSSAQLKTLPLMLWGDINYRLNPVLAVVSTL 574



 Score = 52.0 bits (123), Expect = 3e-11
 Identities = 44/223 (19%), Positives = 93/223 (41%), Gaps = 28/223 (12%)

Query: 6   ILLRVAVGLILVWLMVPVLIIVPMSFSGARFLAFPPPSWSLRWYEAYLESAAWMQATRVS 65
           +LL  AV  +    ++P++ ++ +S SG        PSW   +   +     W    R +
Sbjct: 27  LLLLPAVAFLGFIYLLPLIDLIRISISG--------PSWLTYFQRVFAVPLYWESLVR-T 77

Query: 66  LILAVSSAIIATVLGTAAAYALNLSTSRLVRSL-QVVLLLPLVVPIVITAVGVFLVYANV 124
           + ++V+ A +  + G   A  ++  T  L R+L    ++LP  + I+I      ++    
Sbjct: 78  MQISVTVAFLCLLFGYPTALLIH-RTQGLTRALIATAIVLPYFIAILIRTYAWMVLLGRT 136

Query: 125 G-----------------LLATMSGLILANVMLGLPFVIISVLTGLRKFDPAQEMVSRSL 167
           G                 LL     ++L    + LP +++++ + + + DP     + + 
Sbjct: 137 GPVNKLLVAIGILGEPVQLLFHRGTVLLGMTAVLLPLMVLTIYSSVSRLDPGLTRAALAS 196

Query: 168 GMNRLRTFFIVTLPQIRPSVISGLLFAFISALDETVVAIFISG 210
           G   +  F+ V LP   P + +G L  F++A+   +    + G
Sbjct: 197 GAGPIAVFWRVLLPLTLPGIGAGFLLVFVAAIGFFITPTLLGG 239