Pairwise Alignments

Query, 264 a.a., hypothetical protein from Xanthobacter sp. DMC5

Subject, 275 a.a., binding-protein-dependent transport systems inner membrane component (RefSeq) from Shewanella loihica PV-4

 Score =  108 bits (269), Expect = 2e-28
 Identities = 78/275 (28%), Positives = 144/275 (52%), Gaps = 21/275 (7%)

Query: 3   LSRILLRVAVGLILVW-----LMVPVLIIVPMSFSGARFLAFPPPSWSLRWYEAYLESAA 57
           +S  L +++   +++W     L  P+ I+V  SF+ ++ +      +S +WY        
Sbjct: 1   MSNRLRKLSFSTLMLWGGMFFLYAPMFILVFYSFNESKLVTVWG-GFSAKWYGELFRDDQ 59

Query: 58  WMQATRVSLILAVSSAIIATVLGTAAAYALNLSTSRLVRS-----LQVVLLLPLVVPIVI 112
            + A   SL +A  ++ +A +LGT AA+ +    +R  RS     L  ++  PLV+P VI
Sbjct: 60  ILDAVATSLKVAFFASTMAVILGTMAAFVM----TRFARSWGKMTLSNMITAPLVMPEVI 115

Query: 113 TAVGVFLVYANVGLLAT------MSGLILANVMLGLPFVIISVLTGLRKFDPAQEMVSRS 166
           T + + L++ ++  L        M  + +A+      +V + V + LR+ D + E  ++ 
Sbjct: 116 TGLSLLLLFVHMADLLGWPAERGMLTVWIAHSTFCAAYVAVVVSSRLRELDMSIEEAAQD 175

Query: 167 LGMNRLRTFFIVTLPQIRPSVISGLLFAFISALDETVVAIFISGGEYQTLTKRMFTALRD 226
           LG   L+TFF +T+P I P++I+G L +F  +LD+ V+A F SG    TL   +F+++R 
Sbjct: 176 LGATPLKTFFHITVPMISPALIAGWLLSFSLSLDDLVIASFASGPGATTLPMVVFSSVRM 235

Query: 227 EIDPTIAAISTLLTAISFLMVILVSLSARTAPRKN 261
            + P I A++TL+  I  L+  +    AR A +++
Sbjct: 236 GVSPKINALATLIILIVSLIAFISWYLARRADKRS 270