Pairwise Alignments

Query, 385 a.a., Cytochrome bd-I ubiquinol oxidase subunit 2 from Xanthobacter sp. DMC5

Subject, 378 a.a., cytochrome d ubiquinol oxidase subunit II from Vibrio cholerae E7946 ATCC 55056

 Score =  322 bits (824), Expect = 1e-92
 Identities = 159/372 (42%), Positives = 238/372 (63%), Gaps = 2/372 (0%)

Query: 6   LIDYDALRVIWWLLLGVLLIGFAIMDGFDLGTGMLLPFVARTDLERRVVINTVGPVWEGN 65
           + +YD LR+IWW L+G LLIGF I DGFD+G G LLP + +++ ++RV+IN++ P W+GN
Sbjct: 1   MFEYDTLRLIWWGLIGALLIGFMITDGFDMGVGALLPILGQSESDKRVMINSIAPHWDGN 60

Query: 66  QVWLILGGGAIFAAWPPLYAVSFSGFYLAMFAILFALILRPVGFKYRSKREGAAWRTAWD 125
           QVWLI  GGA+FAAWP +YA SFS  Y+AM+ IL AL LRP+  +YR+K +  +WR   D
Sbjct: 61  QVWLITAGGALFAAWPLVYATSFSSLYIAMYLILLALWLRPLALEYRAKIDTPSWRKICD 120

Query: 126 WALFVGGLVPALVMGVAVGNVLQGVPFHLNDELRIFYDGTTLIELLNPYGLLCGLLSVAM 185
            ++ + GL+P L+ GVA GN++QG+PF LN  L + Y G + I+L+ P+ +L G + V M
Sbjct: 121 ISISLSGLIPPLLFGVAFGNLMQGLPFSLNALLMVDYHG-SFIDLITPFSVLSGGIGVLM 179

Query: 186 LVMHGANWLVLKTEGEVEARARTIGSAAALVTALLFVLGGAWLYFGVSGYRIVGEIAKDG 245
            ++ G+ WL LKT   +  +AR     + L    LF++GG ++  G++GY IV  +  + 
Sbjct: 180 ALVQGSAWLTLKTSDILHKKARLTAQISVLCLFGLFIIGG-FMVHGMNGYLIVSSLDYNA 238

Query: 246 PSNPLAKAAELSPHAWFANYGARPWIIAGPLLGIAGALASFAALRARREIGAILASALAI 305
            SNPL K       AW  N+   PW+   P+ G+  A+  F + + + +    + +++  
Sbjct: 239 ISNPLNKVVFQQAGAWLTNFERYPWMWFAPMGGLMMAMGVFLSAKWKNDAITFVCASVTN 298

Query: 306 FGIISTVGLSMFPFILPSSIDPRSSLIVWDASSSHLTLFIMLVCAVVFVPVILAYTTWVY 365
             II T G +MFPFI+PSS +P  SL +WDA+SS  TL IM   A V +P+IL YT + Y
Sbjct: 299 ACIILTAGFAMFPFIMPSSFEPSHSLTLWDATSSERTLNIMTGVAFVMLPIILFYTAFSY 358

Query: 366 RVLWGKVDAKAI 377
           R ++G++D + I
Sbjct: 359 RTMFGRLDKQYI 370