Pairwise Alignments

Query, 385 a.a., Cytochrome bd-I ubiquinol oxidase subunit 2 from Xanthobacter sp. DMC5

Subject, 378 a.a., cytochrome d ubiquinol oxidase subunit II from Vibrio cholerae E7946 ATCC 55056

 Score =  375 bits (963), Expect = e-108
 Identities = 189/380 (49%), Positives = 244/380 (64%), Gaps = 2/380 (0%)

Query: 6   LIDYDALRVIWWLLLGVLLIGFAIMDGFDLGTGMLLPFVARTDLERRVVINTVGPVWEGN 65
           + DY+ LR+IWW+L+GVLL+GFAI DGFD+G G L+P + + D ERRV+IN++ P W+GN
Sbjct: 1   MFDYEILRLIWWVLIGVLLVGFAITDGFDMGVGALVPIIGKNDNERRVMINSIAPHWDGN 60

Query: 66  QVWLILGGGAIFAAWPPLYAVSFSGFYLAMFAILFALILRPVGFKYRSKREGAAWRTAWD 125
           QVWLI  GGA+FAAWP +YA SFSGFYLAM   L AL LRPVG  YRSK E   WR  WD
Sbjct: 61  QVWLITAGGALFAAWPLVYATSFSGFYLAMIVTLAALWLRPVGLDYRSKIESTKWRNNWD 120

Query: 126 WALFVGGLVPALVMGVAVGNVLQGVPFHLNDELRIFYDGTTLIELLNPYGLLCGLLSVAM 185
            A+   G +P ++ GVA GN+LQGVPF L+D L   Y G +   LLNP+ LLCGL+S+ M
Sbjct: 121 LAISASGFIPPVIFGVAFGNLLQGVPFQLSDFLMPTYHG-SFFGLLNPFALLCGLVSLFM 179

Query: 186 LVMHGANWLVLKTEGEVEARARTIGSAAALVTALLFVLGGAWLYFGVSGYRIVGEIAKDG 245
            ++ G+ WL +KT   V  RAR +     L+TA+ FV  G W+   + GY IVG I  + 
Sbjct: 180 TLLQGSAWLQMKTTSHVHQRARNVAQLTGLLTAVCFVAAGFWVQH-IDGYMIVGAIDGNA 238

Query: 246 PSNPLAKAAELSPHAWFANYGARPWIIAGPLLGIAGALASFAALRARREIGAILASALAI 305
            SNPL K       AW  N+   P +   P LG+   L S  A R  +   A L S+L  
Sbjct: 239 ASNPLNKEVIREAGAWLHNFEQVPVLWLAPALGVLMPLLSVLASRLDKGGLAFLTSSLGN 298

Query: 306 FGIISTVGLSMFPFILPSSIDPRSSLIVWDASSSHLTLFIMLVCAVVFVPVILAYTTWVY 365
            G+I T G +MFPF++PSS++P  SL +WDA+SS LTL +M V AVV VP+IL YT W Y
Sbjct: 299 AGVIFTAGFAMFPFVMPSSLNPAHSLTMWDATSSKLTLELMTVVAVVMVPIILGYTIWSY 358

Query: 366 RVLWGKVDAKAIADGSGHAY 385
             ++G++D K I D     Y
Sbjct: 359 YKMFGRLDDKFIEDNKNSLY 378