Pairwise Alignments

Query, 385 a.a., Cytochrome bd-I ubiquinol oxidase subunit 2 from Xanthobacter sp. DMC5

Subject, 330 a.a., cytochrome BD ubiquinol oxidase subunit II from Vibrio cholerae E7946 ATCC 55056

 Score =  130 bits (328), Expect = 4e-35
 Identities = 112/363 (30%), Positives = 167/363 (46%), Gaps = 53/363 (14%)

Query: 15  IWWLLLGVLLIGFAIMDGFDLGTGMLLPFVARTDLERRV-VINTVGPVWEGNQVWLILGG 73
           I+ LLLG  +  +A++DG+DLG G+LLP   R D+ +R  +I ++GP W+ N+ WL+L  
Sbjct: 8   IYLLLLGFTVFMYAVLDGYDLGVGILLP---RNDVAQRDRMIASIGPFWDANETWLVLAV 64

Query: 74  GAIFAAWPPLYAVSFSGFYLAMFAILFALILRPVGFKYRSKREGAAWRTAWDWALFVGGL 133
           G +  A+P  +++ F+  YL    +L ALI+R V F +R+K + A  +  WD    +G L
Sbjct: 65  GILLIAFPTAHSLIFTELYLPTALMLIALIMRGVAFDFRAKAK-ADHKDHWDLCFKIGSL 123

Query: 134 VPALVMGVAVGNVLQGVPFHLNDELRIFYDGTTLIELLNPYGLLCGLLSVAMLVMHGANW 193
           + AL  G  +G  + G  F    E   F              +L  L   A  V  G  W
Sbjct: 124 LAALTQGYMIGRYVVG--FESAPEAYAF-------------AVLSALCVAAAYVYIGGAW 168

Query: 194 LVLKTEGEVEARA----RTIGSAAALVTALLFVLGGAWLYFGVS-GYRIVGEIAKDGPSN 248
           LVLKTEGE++ RA    R  G  AAL   L   L   W+   V+  +    E+    P  
Sbjct: 169 LVLKTEGELQVRAARWSRKAGWLAAL-GVLSVSLVNPWVNSAVAERWFSFPEVILLAPVP 227

Query: 249 PLAKAAELSPHAWFANYGARPWIIAGPLLGIAGALASFAALRARREIGAILASALAIFGI 308
            +  A  L    +             P +  AG    F         G +L   L+  G+
Sbjct: 228 IIVFATILVVDRYLKRV---------PTVNDAGVQWPF--------FGVVLIFGLSFLGL 270

Query: 309 ISTVGLSMFPFILPSSIDPRSSLIVWDASSSHLTLFIMLVCAVVFVPVILAYTTWVYRVL 368
                 S FP I+P  +  +       A+SS  TL ++ +  V+ +P IL YT +VYR+ 
Sbjct: 271 ----AYSFFPEIVPGIMTAQ------QAASSPETLMVVGIGVVIVMPTILLYTFFVYRIF 320

Query: 369 WGK 371
            GK
Sbjct: 321 KGK 323