Pairwise Alignments

Query, 525 a.a., Cytochrome bd-I ubiquinol oxidase subunit 1 from Xanthobacter sp. DMC5

Subject, 530 a.a., cytochrome d terminal oxidase subunit 1 from Vibrio cholerae E7946 ATCC 55056

 Score =  579 bits (1493), Expect = e-170
 Identities = 285/505 (56%), Positives = 372/505 (73%), Gaps = 4/505 (0%)

Query: 2   ILDTVDLSRLQFAVTALYHFLFVPLTLGLSVLLAIMETVYVMTGRPIWRQMTKFWGTLFG 61
           ++D V+LSRLQFA+TA++HFLFVPLT+G+S LLAIME++YV+TG+ I++ MT+FWG LFG
Sbjct: 5   MIDVVELSRLQFALTAMFHFLFVPLTIGMSCLLAIMESIYVLTGKQIYQDMTRFWGKLFG 64

Query: 62  INFVLGVATGIVMEFQFGMNWSYYSHYVGDIFGAPLAIEGLMAFFLEATFVGLFFFGWDR 121
           INF LGV TG+ MEFQFG NWSYYSHYVGDIFGAPLAIE L+AFFLE+TFVGLFFFGW R
Sbjct: 65  INFALGVTTGLTMEFQFGTNWSYYSHYVGDIFGAPLAIEALVAFFLESTFVGLFFFGWSR 124

Query: 122 LSKVGHLVTTYAVAMGSNLSALWILIANGWMQNPTGAAFNPQTMRMEVSDFYAVLFNPVA 181
           LSK  HL+ T+ VA+GS+ SALWIL+ANGWMQNP GA FN QTMRME++ F  V+ NPVA
Sbjct: 125 LSKRQHLLITWLVALGSSFSALWILVANGWMQNPVGAEFNYQTMRMEMTSFAEVVLNPVA 184

Query: 182 QAKFVHTVSAGYVTASFFVLGVSAWYLLKGRHIDLAKRSMTVAASFGLAASLSVVVLGDE 241
           Q KF+HTV++ Y   + F+LGVS++YLL+GR I+ A+RS  +AA+FG+AA +SV+VLGDE
Sbjct: 185 QVKFLHTVASAYTCGAMFILGVSSYYLLQGRDIEFARRSFAIAATFGMAAIISVIVLGDE 244

Query: 242 SGYLDGEHQKMKLAAIEAMWETEPAPAGFTIVGLPDQAARETRFAVRVPWVLGLIATRTL 301
           SGY  G+ QK+KLAAIEA W TEPAPA FT+ GLP+Q   +T +A+++P+++GLIATR+ 
Sbjct: 245 SGYKLGDVQKVKLAAIEAEWHTEPAPAAFTLFGLPNQKEGKTDYAIKIPYLMGLIATRSF 304

Query: 302 TTQIPGIEELVGHAETRIKSGIVAFDALQQIRAAGSSAAIAPAVKQAFEDNGGNLGYALL 361
             Q+ G+ +L      RI++G+VA+  L++++A  +S       ++ FE    +LGY LL
Sbjct: 305 DEQVTGLHDLRHEHLLRIRNGMVAYQLLERLQAGDASV----ETQRKFEQTKHDLGYGLL 360

Query: 362 LKRYVDDPRKATAAEVNQAAWDTVPNVPTLFWSFRVMVGLGFFFIAFTAFVFYLSARRRL 421
           LKRY D    A  A++ QAA D++P V  LFWSFR+MVG GF  +         + R+R+
Sbjct: 361 LKRYTDTITDANEAQIQQAADDSMPTVWPLFWSFRIMVGCGFIMLFVFGAALLQTCRQRI 420

Query: 422 DRSRTLLWIAVLAIPLPWIAAELGWVVAEVGRQPWIIEGVLPTAAAVSSLGAGTVLATLA 481
                +L  A+ +IPLPWIA E GW VAE GRQPW I  VLP   AVSS     ++ +LA
Sbjct: 421 THKPWVLKAALWSIPLPWIAIEAGWFVAEYGRQPWAIGEVLPVTVAVSSQTFENLITSLA 480

Query: 482 GFAAIYTVLIVVEMTLMFRAIRKGP 506
              ++YTV I VE  L+    RKGP
Sbjct: 481 IILSLYTVFIFVESYLIVTVARKGP 505