Pairwise Alignments

Query, 525 a.a., Cytochrome bd-I ubiquinol oxidase subunit 1 from Xanthobacter sp. DMC5

Subject, 541 a.a., cytochrome d terminal oxidase subunit 1 from Vibrio cholerae E7946 ATCC 55056

 Score =  602 bits (1551), Expect = e-176
 Identities = 290/505 (57%), Positives = 377/505 (74%), Gaps = 4/505 (0%)

Query: 2   ILDTVDLSRLQFAVTALYHFLFVPLTLGLSVLLAIMETVYVMTGRPIWRQMTKFWGTLFG 61
           ++D VDLSRLQFA+TA+YHFLFVPLTLG++ LLAIME++YVMT + I++ MTKFWG LFG
Sbjct: 14  MIDVVDLSRLQFALTAMYHFLFVPLTLGMAFLLAIMESLYVMTDKQIYKDMTKFWGKLFG 73

Query: 62  INFVLGVATGIVMEFQFGMNWSYYSHYVGDIFGAPLAIEGLMAFFLEATFVGLFFFGWDR 121
           INF LGVATG+ MEFQFG NWSYYSHYVGDIFGAPLAIE L+AFFLE+TFVGLFFFGWDR
Sbjct: 74  INFALGVATGLTMEFQFGTNWSYYSHYVGDIFGAPLAIEALVAFFLESTFVGLFFFGWDR 133

Query: 122 LSKVGHLVTTYAVAMGSNLSALWILIANGWMQNPTGAAFNPQTMRMEVSDFYAVLFNPVA 181
           LSK  HLV T+ VA+GSN SALWIL+ANGWMQNP G+ FN +TMRME+  F  V+ NPVA
Sbjct: 134 LSKRQHLVVTWLVALGSNFSALWILVANGWMQNPVGSEFNFETMRMEMVSFADVVLNPVA 193

Query: 182 QAKFVHTVSAGYVTASFFVLGVSAWYLLKGRHIDLAKRSMTVAASFGLAASLSVVVLGDE 241
           Q KFVHTV+AGY T + F+LG+SA+YLLKGR +  A+RS  +AASFG+A+ LSV+VLGDE
Sbjct: 194 QVKFVHTVAAGYTTGAMFILGISAYYLLKGRDVAFARRSFAIAASFGMASVLSVIVLGDE 253

Query: 242 SGYLDGEHQKMKLAAIEAMWETEPAPAGFTIVGLPDQAARETRFAVRVPWVLGLIATRTL 301
           SGY  GE Q++KLAAIE+ W TEPAPA FT+ G+P+Q    T +A+++P+ LG+IATR+L
Sbjct: 254 SGYELGEVQRVKLAAIESEWHTEPAPAAFTLFGIPNQEEMRTDYAIKIPFALGIIATRSL 313

Query: 302 TTQIPGIEELVGHAETRIKSGIVAFDALQQIRAAGSSAAIAPAVKQAFEDNGGNLGYALL 361
             Q+ G+ +L      RI++GI A+D L+++RA   +    P    AF++   +LGY LL
Sbjct: 314 DEQVVGLRDLRDEHVERIRTGIYAYDLLERLRAGEKT----PENMAAFDEVKHDLGYGLL 369

Query: 362 LKRYVDDPRKATAAEVNQAAWDTVPNVPTLFWSFRVMVGLGFFFIAFTAFVFYLSARRRL 421
           LKRY D    AT  ++  AA D++P V  LFWSFR+MV  GF  +      F  + R+++
Sbjct: 370 LKRYTDKVTDATEEQIQAAADDSIPTVWPLFWSFRIMVACGFIMLVVFGAAFIQTCRQKI 429

Query: 422 DRSRTLLWIAVLAIPLPWIAAELGWVVAEVGRQPWIIEGVLPTAAAVSSLGAGTVLATLA 481
           ++ + +L  A+ +IPLPWIA E GW VAE GRQPW +  +LP   A S+L AG ++ ++ 
Sbjct: 430 EQKKWVLKAALFSIPLPWIAVETGWFVAEYGRQPWAVGEILPVNVAASALSAGEIITSML 489

Query: 482 GFAAIYTVLIVVEMTLMFRAIRKGP 506
              A+YT+ ++ E+ LM +  RKGP
Sbjct: 490 AILALYTIFLIAEVYLMVKFTRKGP 514