Pairwise Alignments

Query, 525 a.a., Cytochrome bd-I ubiquinol oxidase subunit 1 from Xanthobacter sp. DMC5

Subject, 445 a.a., cytochrome ubiquinol oxidase subunit I from Vibrio cholerae E7946 ATCC 55056

 Score =  208 bits (530), Expect = 3e-58
 Identities = 113/308 (36%), Positives = 172/308 (55%), Gaps = 3/308 (0%)

Query: 2   ILDTVDLSRLQFAVTALYHFLFVPLTLGLSVLLAIMETVYVMTGRPIWRQMTKFWGTLFG 61
           +LDT+ LSR+QFA    +H LF  +T+ L  +L   +  Y+ T    W  +  FW  +F 
Sbjct: 1   MLDTLMLSRIQFAANISFHILFPTITIALGWILVFFKWRYLRTQVSEWLDLYYFWVKVFA 60

Query: 62  INFVLGVATGIVMEFQFGMNWSYYSHYVGDIFGAPLAIEGLMAFFLEATFVGLFFFGWDR 121
           + F LGV +GI M FQFG NW  +   VG++ G  L  E + AFF+EATF+G+  FG  R
Sbjct: 61  LTFALGVVSGITMSFQFGTNWPGFMERVGNVAGPLLGYEVMTAFFMEATFLGVMLFGRGR 120

Query: 122 LSKVGHLVTTYAVAMGSNLSALWILIANGWMQNPTGAAFNPQTMRMEVSDFYAVLFNPVA 181
           + +  H ++T  VA+G++LSA WIL+ N WM  P G  +      + V+ +  V+FNP  
Sbjct: 121 VPEWLHTLSTVLVAVGTSLSAFWILVLNSWMHTPAG--YEVIDGVVHVTSWKEVIFNPSM 178

Query: 182 QAKFVHTVSAGYVTASFFVLGVSAWYLLKGRHIDLAKRSMTVAASFGLAASLSVVVLGDE 241
             +  HT+ A  +TASF + G+SA+ +L+      AK  + VA S    A    +++GD 
Sbjct: 179 PYRLAHTLLASALTASFLIAGISAYQVLRNAKHQAAKMGLKVAVSVAALAIPVQILVGDL 238

Query: 242 SGYLDGEHQKMKLAAIEAMWETEPAPAGFTIVGLPDQAARETRFAVRVPWVLGLIATRTL 301
            G    EHQ  K+AA+E +W+TE   A   +  LP++  R   FA+ +P +  LI T  +
Sbjct: 239 HGLNTLEHQPAKIAAMEGVWQTERG-APLLLFALPNEETRSNDFALGIPNLASLILTHDM 297

Query: 302 TTQIPGIE 309
             +I G++
Sbjct: 298 NGEIVGLD 305



 Score = 73.6 bits (179), Expect = 1e-17
 Identities = 43/130 (33%), Positives = 69/130 (53%), Gaps = 2/130 (1%)

Query: 386 PNVPTLFWSFRVMVGLGFFFIAFTAFVFYLSARRRLDRSRTLLWIAVLAIPLPWIAAELG 445
           P V  LF+ FRVMVG+G   +  + F  +   R +    +  ++  +      W+A   G
Sbjct: 312 PPVAPLFFGFRVMVGVGVLMLLVSWFGAWRVWRNK-PLPKPYMYALIGMTFSGWVATIAG 370

Query: 446 WVVAEVGRQPWIIEGVLPTAAAVSSLGAGTVLATLAGFAAIYTVLIVVEM-TLMFRAIRK 504
           W V E+GRQPW++ GVL TA AV+ + + +V  +L  +   Y VL+V  + TL + A + 
Sbjct: 371 WYVTEIGRQPWLVSGVLRTAEAVTPVASSSVGISLTLYLITYVVLLVAYVHTLFYLARKT 430

Query: 505 GPEPDEAPEA 514
           G  P  +P +
Sbjct: 431 GHAPQVSPSS 440