Pairwise Alignments

Query, 525 a.a., Cytochrome bd-I ubiquinol oxidase subunit 1 from Xanthobacter sp. DMC5

Subject, 518 a.a., cytochrome bd ubiquinol oxidase, subunit I (RefSeq) from Shewanella loihica PV-4

 Score =  598 bits (1541), Expect = e-175
 Identities = 290/506 (57%), Positives = 377/506 (74%), Gaps = 4/506 (0%)

Query: 1   MILDTVDLSRLQFAVTALYHFLFVPLTLGLSVLLAIMETVYVMTGRPIWRQMTKFWGTLF 60
           ++ + V+LSRLQFA+TA+YHFLFVPLTLGL+ LLAIME++YVMT + I++ MTKFWG LF
Sbjct: 2   IVEEVVELSRLQFALTAMYHFLFVPLTLGLAFLLAIMESLYVMTNKQIYKDMTKFWGKLF 61

Query: 61  GINFVLGVATGIVMEFQFGMNWSYYSHYVGDIFGAPLAIEGLMAFFLEATFVGLFFFGWD 120
           GINF LGV TG+ MEFQFG NWSYYSHYVGDIFGAPLAIEGLMAFFLE+T VG+FFFGWD
Sbjct: 62  GINFALGVTTGLAMEFQFGTNWSYYSHYVGDIFGAPLAIEGLMAFFLESTLVGMFFFGWD 121

Query: 121 RLSKVGHLVTTYAVAMGSNLSALWILIANGWMQNPTGAAFNPQTMRMEVSDFYAVLFNPV 180
           R SK  HL  T+ VA+GSN+SALWIL+ANGWMQNP G+ FN +TMRME++ F  VLFNPV
Sbjct: 122 RFSKRQHLAVTWLVALGSNMSALWILVANGWMQNPVGSVFNYETMRMEMTSFAEVLFNPV 181

Query: 181 AQAKFVHTVSAGYVTASFFVLGVSAWYLLKGRHIDLAKRSMTVAASFGLAASLSVVVLGD 240
           AQ KFVHTV++GYV  + FVL +S++Y+LK R +  A+RS  +AASFG+A+ LSV+VLGD
Sbjct: 182 AQVKFVHTVASGYVAGAMFVLAISSYYILKKRDLPFARRSFAIAASFGMASILSVIVLGD 241

Query: 241 ESGYLDGEHQKMKLAAIEAMWETEPAPAGFTIVGLPDQAARETRFAVRVPWVLGLIATRT 300
           ESGY  GE Q++KLAAIEA W TEPAPA FT VG P+Q    T +A+++P+ +G+IATR+
Sbjct: 242 ESGYKVGEAQRVKLAAIEAEWHTEPAPAAFTAVGFPNQETMHTDYAIKIPYAMGIIATRS 301

Query: 301 LTTQIPGIEELVGHAETRIKSGIVAFDALQQIRAAGSSAAIAPAVKQAFEDNGGNLGYAL 360
           +  ++ GI +L+   E RI++G+ A+  L ++RA   +    P ++ AFE+   +LGY L
Sbjct: 302 IDEEVTGIRDLIVEHEERIRNGMKAYAMLTELRAGKET----PELRAAFEEAKVDLGYGL 357

Query: 361 LLKRYVDDPRKATAAEVNQAAWDTVPNVPTLFWSFRVMVGLGFFFIAFTAFVFYLSARRR 420
           LLKRY D+   AT  ++  AA D++P+V  +FWSFRVMVGLG   +   A  F+ S R +
Sbjct: 358 LLKRYTDNVVDATEEQIKAAAKDSIPSVAPMFWSFRVMVGLGVVMLFVFAAAFWQSTRHQ 417

Query: 421 LDRSRTLLWIAVLAIPLPWIAAELGWVVAEVGRQPWIIEGVLPTAAAVSSLGAGTVLATL 480
           ++    +L  A+ ++PLPWIA E GW VAE GRQPW I  VLPT  + SSL A  +  ++
Sbjct: 418 IEEKPWVLKAALYSLPLPWIAIECGWFVAEYGRQPWTISEVLPTFMSASSLTAADLWFSI 477

Query: 481 AGFAAIYTVLIVVEMTLMFRAIRKGP 506
                 YTVL+V+E+ LM +  RKGP
Sbjct: 478 ISITLFYTVLLVIELFLMIKFARKGP 503