Pairwise Alignments

Query, 525 a.a., Cytochrome bd-I ubiquinol oxidase subunit 1 from Xanthobacter sp. DMC5

Subject, 518 a.a., cytochrome d ubiquinol oxidase, subunit I (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  605 bits (1559), Expect = e-177
 Identities = 295/506 (58%), Positives = 381/506 (75%), Gaps = 4/506 (0%)

Query: 1   MILDTVDLSRLQFAVTALYHFLFVPLTLGLSVLLAIMETVYVMTGRPIWRQMTKFWGTLF 60
           ++ + V+LSRLQFA+TA+YHFLFVPLTLGL+ LLAIM ++YVMT + I++ MTKFWG LF
Sbjct: 2   IVEEVVELSRLQFALTAMYHFLFVPLTLGLAFLLAIMVSLYVMTDKHIYKDMTKFWGKLF 61

Query: 61  GINFVLGVATGIVMEFQFGMNWSYYSHYVGDIFGAPLAIEGLMAFFLEATFVGLFFFGWD 120
           GINF LGV+TG+ MEFQFG NWSYYSHYVGDIFGAPLAIEGLMAFFLE+T VG+FFFGWD
Sbjct: 62  GINFALGVSTGLAMEFQFGTNWSYYSHYVGDIFGAPLAIEGLMAFFLESTLVGMFFFGWD 121

Query: 121 RLSKVGHLVTTYAVAMGSNLSALWILIANGWMQNPTGAAFNPQTMRMEVSDFYAVLFNPV 180
           R SK  HL  T+ VA+GSNLSALWIL+ANGWMQNP G+ FN +TMRME++ F  V+FNPV
Sbjct: 122 RFSKRQHLAVTWLVALGSNLSALWILVANGWMQNPVGSVFNYETMRMEMTSFAEVVFNPV 181

Query: 181 AQAKFVHTVSAGYVTASFFVLGVSAWYLLKGRHIDLAKRSMTVAASFGLAASLSVVVLGD 240
           AQ KFVHTV++GYVT + FVL +S++Y+LK R +  A+RS  +AASFG+AA LSV+VLGD
Sbjct: 182 AQVKFVHTVASGYVTGAMFVLAISSYYILKKRDLPFARRSFAIAASFGMAAILSVIVLGD 241

Query: 241 ESGYLDGEHQKMKLAAIEAMWETEPAPAGFTIVGLPDQAARETRFAVRVPWVLGLIATRT 300
           ESGY  GE Q++KLAAIEA W TEPAPA FT VG P+Q   ET FAV++P+ +G++ATR+
Sbjct: 242 ESGYKVGEAQRVKLAAIEAEWHTEPAPAAFTAVGFPNQETMETDFAVKIPYAMGIVATRS 301

Query: 301 LTTQIPGIEELVGHAETRIKSGIVAFDALQQIRAAGSSAAIAPAVKQAFEDNGGNLGYAL 360
           L  Q+ GI +L+   E RI++G+ A+  L ++RA  +S    P ++  FE    +LGY L
Sbjct: 302 LDEQVTGIHDLISEHEVRIRNGMKAYAMLVKLRAGDTS----PELRAEFEAAKVDLGYGL 357

Query: 361 LLKRYVDDPRKATAAEVNQAAWDTVPNVPTLFWSFRVMVGLGFFFIAFTAFVFYLSARRR 420
           LLKRY ++   AT  ++  AA D++PNV  +FWSFRVMVGLGF  +   A  F+ S R +
Sbjct: 358 LLKRYTNNVVDATEEQIKAAAKDSIPNVAPMFWSFRVMVGLGFVMLFVFAAAFWQSTRHQ 417

Query: 421 LDRSRTLLWIAVLAIPLPWIAAELGWVVAEVGRQPWIIEGVLPTAAAVSSLGAGTVLATL 480
           ++ ++ +L  A+ ++PLPWIA E GW VAE GRQPW I  VLPT  + SSL  G +  ++
Sbjct: 418 IEENKWVLKAALFSLPLPWIAIECGWFVAEYGRQPWTISEVLPTFMSASSLTTGDLWFSI 477

Query: 481 AGFAAIYTVLIVVEMTLMFRAIRKGP 506
              +  YTVL+V+E+ LM +  R GP
Sbjct: 478 ISISLFYTVLLVIEIFLMLKFARLGP 503