Pairwise Alignments

Query, 311 a.a., HTH-type transcriptional regulator CdhR from Xanthobacter sp. DMC5

Subject, 319 a.a., AraC-family transcription regulator FtrA from Caulobacter crescentus NA1000

 Score =  202 bits (513), Expect = 1e-56
 Identities = 119/306 (38%), Positives = 158/306 (51%), Gaps = 5/306 (1%)

Query: 6   LAYDGISPFMLSTPLAVFGEPFLAGGHS----VDVCAQAPRLSATGGLVIEAPHPLSTAR 61
           LAYDG+  F     + +F  P    G           +   L   GG+ +     L    
Sbjct: 11  LAYDGLCTFEYGVAVELFALPRPEMGEGWYRFATAAVEPGDLRGLGGVHVVGDGGLELLA 70

Query: 62  AADVVILPGWRNADEPVPEALVAELKAADARGALVVGLCLGAFGLAQAGLLNGRRATTHW 121
            A +++ PGWR  D PVP  L+  L+AA A GA ++ +C G F LA  GLL+GRRATTHW
Sbjct: 71  GASIIVAPGWRGLDAPVPRPLIEALRAAHAGGARLMSICSGVFVLAATGLLDGRRATTHW 130

Query: 122 ARAQAFAERYPEVRVDAGALFVDEGQMLTSAGIAAGLDCCLHLLARLSGVGEANRVARHL 181
             A A    +P ++V    L+VDEG +LTSAG AAG+D  LHL+ R  G   AN VAR L
Sbjct: 131 RYADALRAHHPAIQVQPDVLYVDEGDVLTSAGSAAGIDLGLHLIRRDFGPEAANTVARRL 190

Query: 182 VVAPQRAGAQPQIIARPTIATPADQRVTELLETLRAAPSATPALDDLAVRMGMSRRSLTR 241
           VV P R G Q Q + RP        R+  +L+ +RA  +    +  LA   GMS R+  R
Sbjct: 191 VVPPHRDGGQAQFVQRPVPVAHEASRLGPILDQMRANLADEHTIKTLAALAGMSERTFLR 250

Query: 242 HIRARTGGSLGDWLKRARLAQAQDLLASGARGLDAIAQRCGFADAQALRLAFRSELGTTP 301
              A TG +   WL   RL  A+DLL + +  +D +A+  G   A ALR  FR +  TTP
Sbjct: 251 RFEAVTGATPARWLLAERLNHARDLLETASTSIDQVARAVGLG-APALRHHFRRQFSTTP 309

Query: 302 RQWLAR 307
             + AR
Sbjct: 310 GAYRAR 315