Pairwise Alignments

Query, 256 a.a., Putative aliphatic sulfonates transport permease protein SsuC from Xanthobacter sp. DMC5

Subject, 294 a.a., ABC transporter permease from Rhodopseudomonas palustris CGA009

 Score =  150 bits (380), Expect = 2e-41
 Identities = 90/259 (34%), Positives = 135/259 (52%), Gaps = 10/259 (3%)

Query: 2   AKRSGLLGERFIGLLTPLALLGLWEAAARMGLVDARFFPPPSSIV-----HTFGAL---V 53
           AK +  L    + L+ PL LL +W+   R      R  PPPS +        FG +    
Sbjct: 32  AKLTARLRTTALALIVPLGLLLVWDLMVRW--TGTRLVPPPSGVATMMWDFAFGGIYDDA 89

Query: 54  ASGELWTNLLASLRRLFLGMLLGGVPALFLGLAMGISKPLRAAIDPLISATYPIPKSAIL 113
            SG L  +   S++R++ G  L  +  + LGL +G    LRA +DP ++   PIP +A L
Sbjct: 90  YSGSLPIHFWKSVQRVYGGFFLAALLGIPLGLMIGRIPLLRALLDPTLALLRPIPVTAWL 149

Query: 114 PLVLLIFGLGEMSKVVMVALGAFYPILINTVMGVANIDKIYLDVGHNYRASRWQVFRTIA 173
           PL ++ FGLG  S V +V LGAFYPIL+NTV GV ++D    +       S  Q+FR++ 
Sbjct: 150 PLSMIFFGLGPKSAVFLVFLGAFYPILLNTVFGVKSVDVRLFEAAGMLGCSGPQLFRSVV 209

Query: 174 LPGALPSIMAGVKLAMGMGLILIAISEMVAASDGIGYMIWNAWQVLTVDTMYVGLLVIAL 233
           LP ALPSI  G++L      ILI + EM    +G+G +I +   +   D +  G+++I +
Sbjct: 210 LPAALPSIFNGLRLGASFAWILIVVGEMTGVPEGLGAVIMDGRTLSRTDLVITGMIIIGI 269

Query: 234 LGFVFSVILDEIERMLIPW 252
            GF+   IL  +    + W
Sbjct: 270 TGFLSDRILVSLSNYFLRW 288