Pairwise Alignments

Query, 530 a.a., hypothetical protein from Xanthobacter sp. DMC5

Subject, 637 a.a., cyclic nucleotide-binding protein from Vibrio cholerae E7946 ATCC 55056

 Score =  138 bits (347), Expect = 7e-37
 Identities = 120/494 (24%), Positives = 209/494 (42%), Gaps = 33/494 (6%)

Query: 55  RRELVSLMTSRVRDVYLRKPFFVDGSTDLVSLCRDLSARRLSEAVVRDGD---------- 104
           ++E   L+TS+V+ +  R    +D    +    + ++   +S  ++ D            
Sbjct: 149 QKEQNDLITSKVKQLLTRSAPTIDKQASIQQAAQRMADENVSALLILDNQILLDTEDDST 208

Query: 105 -RIGIFTTTDLRDALTRDTPPSALMVREVATFEPWCIAPDAELFEALILMLRHRIHRL-L 162
             +GI T  DL   +          V +V T E   +  +A ++EA++ MLR+ +H L +
Sbjct: 209 PMVGIVTERDLCRRVLAQGMDVTQTVSQVMTHEVISLDHNAYVYEAMLAMLRNNVHHLPV 268

Query: 163 VREGGGRAAGGDGILGVLGQLDLMAFVANHSHLIALEAAQAGSLDELKAAARQIDSMVAV 222
           +RE           +G++   D++   + +S L+     Q   +D+L   A ++ +    
Sbjct: 269 LRERQP--------IGIIDMTDIVRHESQNSLLLVSRIYQQTCIDDLAQLANEVKASFVR 320

Query: 223 LSADGVRVEVIAALVGELNAQIFRRLWELLAPEELRANS--CLIVMGSEGRGEQIIKTDQ 280
           L  +     +I   +  +     +R+ EL+  E   A    C +  GS GR EQ+I TDQ
Sbjct: 321 LVNEDANSHMIGTAMSTIGRAFTQRIIELVEAELGAAPLPYCFVAFGSMGRDEQLIVTDQ 380

Query: 281 DNGLILRD-------GFAFAGLDDVTARFTAALIDFGYPPCPGGVMLSRPTWCQPLSAFK 333
           DN LIL D       G  FA   ++  R    L   GYP C G +M S P W      ++
Sbjct: 381 DNALILDDRYDVQQHGAYFAQFAELVCR---GLDRCGYPLCDGEIMASNPKWRMTRKEWE 437

Query: 334 ETLKDWIHGGVQDGPMNLAIFLDAVAVAGDAALAAAARAHVDFLMMGDHGYFARFAQ-AV 392
               DWI        +N +IF D   V G    A      +      +  + A  A+ A+
Sbjct: 438 TCFADWIDNPNPQALLNASIFFDLDGVYGRTKWAEQLSGFIVRRARRNQRFLACLARNAL 497

Query: 393 DRFGESGSWWSRLPGLTGRGAAEVDLKKLGIFPLVHGVRALALEHRITALGTADRLAALV 452
           +R    G + + +    GR    ++LK+ G  PL   +R  AL     A  + +RL  ++
Sbjct: 498 NRTPPLGFFKNFVMEKDGRHNNSINLKRRGTAPLADLIRVHALAAGSRAKNSFERLDDVI 557

Query: 453 AAGHMDEGFARDLTDALRLFMGMKLSSNLRQIADGRPPSNALRLADLGTLDRQALKEALA 512
            AG + +G  +DL DAL     +++      +   R   N++    L   +R+ LK+A  
Sbjct: 558 EAGLLPQGKGKDLRDALEFIAMVRIRHQAIDVEQEREADNSIEPEHLSDFERRNLKDAFQ 617

Query: 513 IVRGFKQWLSRHYR 526
           I+   + +L   Y+
Sbjct: 618 ILSNGQNYLKYRYQ 631