Pairwise Alignments

Query, 530 a.a., hypothetical protein from Xanthobacter sp. DMC5

Subject, 607 a.a., cyclic nucleotide-binding protein from Vibrio cholerae E7946 ATCC 55056

 Score =  269 bits (688), Expect = 2e-76
 Identities = 165/477 (34%), Positives = 251/477 (52%), Gaps = 27/477 (5%)

Query: 61  LMTSRVRDVYLRKPFFVDGSTDLVSLCRDLSARRLSEAVVR-----------DGDRIGIF 109
           ++T   R +Y   PF +     + S+ + L  R +  A+V                  I 
Sbjct: 144 ILTKVDRSIY-HPPFILSPEQPIHSVTQQLKERGIDAALVELHPSDPRLAHNHAHPYAIV 202

Query: 110 TTTDLRDALTRDTPPSALMVREVATFEPWCIAPDAELFEALILMLRHRIHRLLVREGGGR 169
           T T++  A+  +  P    V E+ATF    +     LF A+++M R RI R++V      
Sbjct: 203 TRTNMLHAVMLEGRPLDTPVGEIATFPVLHVDEGDFLFNAMVMMTRQRIKRVMV------ 256

Query: 170 AAGGDGILGVLGQLDLMAFVANHSHLIALEAAQAGSLDELKAAARQIDSMVAVLSADGVR 229
              G+  +G+L  + +++  + HSH++ L  A+A S+DEL  AA +   +V  L + GVR
Sbjct: 257 -CLGNQAVGLLSLIQILSAFSTHSHVLTLAIARAASIDELALAANKQRELVESLMSRGVR 315

Query: 230 VEVIAALVGELNAQIFRRLWELLAPEELRANSCLIVMGSEGRGEQIIKTDQDNGLILRDG 289
              +  L+  +N QI  + +EL+ P  L    CL+V+GSEGRGEQI+KTDQDN LI++DG
Sbjct: 316 TRFVMELIAAVNEQIIEKAFELVVPPALHDQCCLVVLGSEGRGEQILKTDQDNALIIQDG 375

Query: 290 FAFAGLDDVTARFTAALIDFGYPPCPGGVMLSRPTWCQPLSAFKETLKDWIHGGVQDGPM 349
             +     +    T  L+  GYP CPG VM++ P W +  S +K TL DW+     +  M
Sbjct: 376 LEWHQCQPIMETLTHTLLQLGYPLCPGKVMVNNPKWVRSQSDWKRTLTDWVKAARPEQVM 435

Query: 350 NLAIFLDAVAVAGDAALAAAARAHVDFLMMGDHGYFARFAQAVDRFGESGSWWSRLPGLT 409
           ++AIF DA AVAG+ AL A  +AH+  LM G     A F +    F    S    L G  
Sbjct: 436 DIAIFADAHAVAGNRALLAPVKAHLQHLMAGQELILAEFTRPALNF----SVPLTLFGNV 491

Query: 410 GRGAAEVDLKKLGIFPLVHGVRALALEHRITALGTADRLAALVAAGHMDEGFARDLTDAL 469
                 +D+K+ GIFP+VHGVRAL+LEH I A  T DR+ ALV    +++    +L++A 
Sbjct: 492 KSSKQGIDIKQGGIFPIVHGVRALSLEHAIDANNTFDRIEALVKKRVLEQETGDNLSEAF 551

Query: 470 RLFMGMKLSSNLRQIADGRPPSNALRLADLGTLDRQALKEALAIVRGFKQWLSRHYR 526
           +LF+ ++L+  L      +  +N L    L   +R  L+ +L +V+ FKQWL  HY+
Sbjct: 552 KLFLKLRLAQQL----GNQHSTNQLDFKQLDRTERDLLRHSLHVVKKFKQWLGYHYQ 604