Pairwise Alignments

Query, 367 a.a., HTH-type transcriptional repressor CytR from Xanthobacter sp. DMC5

Subject, 335 a.a., DNA-binding transcriptional regulator CytR from Vibrio cholerae E7946 ATCC 55056

 Score =  164 bits (415), Expect = 3e-45
 Identities = 105/334 (31%), Positives = 171/334 (51%), Gaps = 5/334 (1%)

Query: 15  ATLQSVADAVGVHRSTVARAL-DPEQSRRISADVVEKVQAEARRQGYRPDAVASSLRTGR 73
           AT++ VA   GV  +TV+RAL +PE   ++S+   ++V+      GY P+++A +LR   
Sbjct: 2   ATMKDVAQLAGVSTATVSRALMNPE---KVSSSTRKRVEEAVLEAGYSPNSLARNLRRNE 58

Query: 74  SRLIGVVVPDLANPVFAPILGGIGATLAARGYSMMVADSGEDEAGQADIVEKLIARRVDG 133
           S+ I  +VPD+ +P F+ I+ GI       GY +++ DSG+ +  +   V  +  ++ DG
Sbjct: 59  SKTIVAIVPDICDPYFSEIIRGIEDAAMEHGYLVLLGDSGQQKRRENSFVNLVFTKQADG 118

Query: 134 LVLATAKRDDATVSLCLKAGVPTVLVNRGEDGLRASTVVSDDTGGIAVAVAHLAGLGHRR 193
           ++L              K   P V+       L   TV  D+      AV +L  LGH+R
Sbjct: 119 MLLLGTDLPFDVSKPEQKNLPPMVMACEFAPELELPTVHIDNLTSAFEAVNYLTQLGHKR 178

Query: 194 IGHLAGPERLSTGVLRRRGFADAMAAAGLPADAV-TTATAYNREAGRVAAAELLDRWPDI 252
           I  ++GP+  +    R +G+  A+  AG+  +    T   +  EAG  A  +LL      
Sbjct: 179 IAQISGPQHAALCQFRHQGYQQALRRAGITMNPTYCTFGDFTFEAGAKAVRQLLALPEQP 238

Query: 253 TAIAASNDLIALGAYQEAQQRGLRIPQDLSIVGHNDMPLVDMVAPPLTTVRIGHEAMGAR 312
           TAI   ND +A+GA QEA++ GLR+PQDLS+VG +D+       PPLTT+      +G +
Sbjct: 239 TAIFCHNDTMAIGAIQEAKRLGLRVPQDLSVVGFDDIQFAQYCDPPLTTISQPRYEIGRQ 298

Query: 313 AASILLDQIAQPETPPTLALVPARLIARASTAAP 346
           A  ++L+ +   +      L+  +L+ R S A P
Sbjct: 299 AMLMMLELLRGHDVRAGSRLLETKLVVRESAAPP 332