Pairwise Alignments

Query, 899 a.a., Tol-Pal system protein TolB from Xanthobacter sp. DMC5

Subject, 441 a.a., TolB domain-containing protein (RefSeq) from Shewanella loihica PV-4

 Score = 51.2 bits (121), Expect = 1e-10
 Identities = 45/145 (31%), Positives = 71/145 (48%), Gaps = 22/145 (15%)

Query: 513 AFSPDGTKIAFLSYPQDVSPGSNPGNMQLYVKDLATGQLTVESSDSAGHVGNSATTEAFS 572
           A+SPDG ++A++S+    +        +++V+D+ T Q T  +S       N A T    
Sbjct: 217 AWSPDGRRLAYVSFENKQA--------EVFVQDIYTQQRTKVTSFPGI---NGAPT---- 261

Query: 573 FSPDGTKIAFTSYSTNLVPGQGFNGIFIKDLQTGAITELTVDASSYSSHPVFTPDGAHLI 632
           FSPDG K+A T      +   G   I++ D+ T AI  +T +  +  +   +TPDG  LI
Sbjct: 262 FSPDGKKLALT------LSKDGQPEIYVADIATKAIKRVT-NHYAIDTEASWTPDGKSLI 314

Query: 633 FTSSDIGPTYGGSILMASLPATSVT 657
           FTS   G      + +AS   T +T
Sbjct: 315 FTSERGGRPQIYQVALASGKVTRLT 339



 Score = 47.4 bits (111), Expect = 2e-09
 Identities = 58/243 (23%), Positives = 102/243 (41%), Gaps = 52/243 (21%)

Query: 344 NPVVSPDGTEVAFLSTASSLLQVPTNVSIPAFSSPQVLVKNLHTGEVTLASSSATGDVGN 403
           +P  SPDG  +A++S  +                 +V V++++T + T  +S       N
Sbjct: 215 SPAWSPDGRRLAYVSFENK--------------QAEVFVQDIYTQQRTKVTSFPGI---N 257

Query: 404 QASTANIIFTQDGSKVEFYSKASNLVPGDTNGTSDIFVKDIATGAISRIDPNDPNNQDIV 463
            A T    F+ DG K+              +G  +I+V DIAT AI R+      N   +
Sbjct: 258 GAPT----FSPDGKKLALTLSK--------DGQPEIYVADIATKAIKRV-----TNHYAI 300

Query: 464 NGFKAISSDGSKIVFDGAGIGSPHSIFIQDVATGDVTFVCYGNVYNQNLAFSPDGTKIAF 523
           +   + + DG  ++F     G P  I+   +A+G VT + +   +N   + SPDG  + F
Sbjct: 301 DTEASWTPDGKSLIFTSERGGRPQ-IYQVALASGKVTRLTFEGEWNLGGSISPDGRSMVF 359

Query: 524 LSYPQDVSPGSNPGNMQLYVKDLATGQLTVESSDSAGHVGNSATTEAFSFSPDGTKIAF- 582
           ++           G   +   DL T  + V        +  +   E+ S +P+GT + + 
Sbjct: 360 VN--------RTNGKFNIARMDLETRFMQV--------LTTTRLDESPSIAPNGTMVIYG 403

Query: 583 TSY 585
           T+Y
Sbjct: 404 TTY 406



 Score = 46.6 bits (109), Expect = 3e-09
 Identities = 44/151 (29%), Positives = 67/151 (44%), Gaps = 22/151 (14%)

Query: 489 IFIQDVATGDVTFVCYGNVYNQNLAFSPDGTKIAFLSYPQDVSPGSNPGNMQLYVKDLAT 548
           +F+QD+ T   T V      N    FSPDG K+A           S  G  ++YV D+AT
Sbjct: 237 VFVQDIYTQQRTKVTSFPGINGAPTFSPDGKKLALTL--------SKDGQPEIYVADIAT 288

Query: 549 GQLTVESSDSAGHVGNSATTEAFSFSPDGTKIAFTSYSTNLVPGQGFNGIFIKDLQTGAI 608
             +   ++  A        TEA S++PDG  + FTS         G   I+   L +G +
Sbjct: 289 KAIKRVTNHYA------IDTEA-SWTPDGKSLIFTS------ERGGRPQIYQVALASGKV 335

Query: 609 TELTVDASSYSSHPVFTPDGAHLIFTSSDIG 639
           T LT +   ++     +PDG  ++F +   G
Sbjct: 336 TRLTFE-GEWNLGGSISPDGRSMVFVNRTNG 365