Pairwise Alignments

Query, 375 a.a., Nitrate/nitrite binding protein NrtA from Xanthobacter sp. DMC5

Subject, 659 a.a., nitrate transport ATP-binding subunits C and D from Synechococcus elongatus PCC 7942

 Score =  147 bits (370), Expect = 1e-39
 Identities = 105/373 (28%), Positives = 174/373 (46%), Gaps = 23/373 (6%)

Query: 2   RRLAIGFIPLTDAAVLIAAAERGFAMAEGIEIDLHKEVSWANIRDKVNIGLLDGAHMLGP 61
           + + +GF+P  D A L  A E G     G+ ++L   ++W  + D + +G L+GA M+  
Sbjct: 279 KTVRLGFLPGNDCAPLAIAQELGLFQDLGLSVELQSFLTWEALEDSIRLGQLEGALMMAA 338

Query: 62  LAIASSLGLG-HVRVPLVVPFALNLNGSAITIDKHVYAAMGEVGEDLATAPGAALALGKV 120
             +A ++GLG H    +  P  ++ NG AI + +    A     EDL         L   
Sbjct: 339 QPLAMTMGLGGHRPFAIATPLTVSRNGGAIALSRRYLNAGVRSLEDLCQF------LAAT 392

Query: 121 VRQRKAEGRDPLVFAAVYSFSTHTYLIRHFLKAGGVDPDRDVRLVVVPPPFMAESLRGGL 180
            ++ +    DP+   A+        L+R++L + G++P++DV LV + P  M E+L+ G 
Sbjct: 393 PQRLRLAIPDPIAMPAL--------LLRYWLASAGLNPEQDVELVGMSPYEMVEALKAGD 444

Query: 181 IHGFSVGSPWNSVAVDADVGRIAVLGAELFGWVPEKVLGVHARFANAEPEVLHRLVRALY 240
           I GF+ G    ++AV A    +     +++   PEKVLG+   +    PE    L  AL 
Sbjct: 445 IDGFAAGEMRIALAVQAGAAYVLATDLDIWAGHPEKVLGLPEAWLQVNPETAIALCSALL 504

Query: 241 AAARWCEDPANHEDLAKLLGEPRHLNLPA-DILRRTLDGRLHTAPGGVLRSHPDYLVLNR 299
            A   C+DP   + + ++L +P++L   A  +L+R  D  L   P  +LR +  ++    
Sbjct: 505 KAGELCDDPRQRDRIVEVLQQPQYLGSAAGTVLQRYFDFGLGDEPTQILRFNQFHV---- 560

Query: 300 DGANRPSPDHALWMYAQIVAAGQGEFAADAAREAMGVYRPDIFDAAVGPVPVKHPEPDCV 359
           D AN P+P    W+  Q+   G      +       VYR DI++AA+  V      P   
Sbjct: 561 DQANYPNPLEGTWLLTQLCRWGLTPLPKNRQELLDRVYRRDIYEAAIAAVGFPLITPSQR 620

Query: 360 GTQFGEIFDQAAF 372
           G    E+FD   F
Sbjct: 621 GF---ELFDAVPF 630