Pairwise Alignments

Query, 184 a.a., Ribosome maturation factor RimM from Xanthobacter sp. DMC5

Subject, 167 a.a., putative 16S rRNA-processing protein RimM from Phaeobacter inhibens DSM 17395

 Score =  128 bits (322), Expect = 5e-35
 Identities = 73/165 (44%), Positives = 102/165 (61%), Gaps = 8/165 (4%)

Query: 1   MTDRVLVARIGAPHGVRGEVRLFVFTEDPAAILDYDPLTDATGRTRYRITALRAAKDHFV 60
           MT+++ V  I   +GVRGEVRL  F   P  I DY PL+   G   Y IT +RA K+ F 
Sbjct: 1   MTEQICVGAISGSYGVRGEVRLKSFCAMPEDIEDYSPLSTEDGSQTYTITLVRAIKNGFT 60

Query: 61  ARLANVADRTAAEALTNVDLYVPREALP-APEDEDTFYHADLIGLAVEDEAGARIGTVTA 119
           AR+  +  +  A+AL  V L+ PRE LP  P+DE  +YH DL+GL V D  G  +G+V +
Sbjct: 61  ARIGGIETKEQADALKGVRLFAPRERLPNLPDDE--YYHTDLMGLEVYDTGGTLLGSVKS 118

Query: 120 LHDFGAGDILEYA-PALPGIRAKTLMVPFTRAAVPVVDVKARRLV 163
           + + GA D+LE A PA     +KT+++PFT AAVP VD+ + R++
Sbjct: 119 VQNHGASDLLEIAIPA----ESKTVLLPFTLAAVPTVDLASGRII 159