Pairwise Alignments

Query, 262 a.a., hypothetical protein from Xanthobacter sp. DMC5

Subject, 287 a.a., AraC family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

 Score = 43.9 bits (102), Expect = 4e-09
 Identities = 71/246 (28%), Positives = 98/246 (39%), Gaps = 34/246 (13%)

Query: 38  APHQHGAPVFLAGLYGPFGLRVQG-----GSWQACRTALVPAGVLHELD--VGGEPIAVF 90
           A H H     + GL G     V+G     G  Q C   +V +G  H     VG   I V 
Sbjct: 45  ACHDHSYTQIVIGLKGQAEFEVRGMGNIVGPGQGC---VVTSGSDHAFGGVVGQSDILVL 101

Query: 91  YLE-PSIDGAHALAPLVANAREEQGV--LFGGGDGL------PLLRELWEAPDAAGWAGE 141
            +  PS D      PL+     E  V  ++   DG        L++E+  +PD     G 
Sbjct: 102 NMPVPSDDD-----PLLLRKLNELAVGDVYFQLDGQIQRLIQMLVQEMQASPDDL-LLGR 155

Query: 142 ALADMVDVSRRRARAALDPRIQRVAAAMTDAERVPE--------LAALAHKVGLSASRLQ 193
           A  D V    +R  +AL    +     M   +R  E        +A LA  V LS S+  
Sbjct: 156 ACNDTVVALLQRHISALASVHKESRFDMEVVDRYIEQHLAHRISVAQLAGSVFLSESQFH 215

Query: 194 HLFTAEMGVPFRRYRAWGRMRRAIAEIADGS-SFTAAAHAAGFADQAHFTHDFRRTFGAA 252
            LF  +MG+   +Y    R+  A   I  G  +    A   GF++Q+ FTH F R  G +
Sbjct: 216 VLFKEQMGLTPHQYVLNKRVDMAKKLIEQGRLNLGQVAELTGFSNQSTFTHTFSRLHGIS 275

Query: 253 PSQSLR 258
           PSQ  R
Sbjct: 276 PSQYKR 281