Pairwise Alignments

Query, 470 a.a., UDP-N-acetylmuramate--L-alanine ligase from Xanthobacter sp. DMC5

Subject, 451 a.a., UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase from Vibrio cholerae E7946 ATCC 55056

 Score =  159 bits (403), Expect = 1e-43
 Identities = 131/471 (27%), Positives = 212/471 (45%), Gaps = 40/471 (8%)

Query: 10  IHFVGIGGIGMSGIAEVLHNLGYEVQGSDVADSANV-----KRLREHGIKVMIGHAAANV 64
           IH +GI G  M G+A +   LG++V GSD    ANV       L   GI+++ G     +
Sbjct: 3   IHILGICGTFMGGVAMLARQLGHKVTGSD----ANVYPPMSTMLEAQGIEIIEGFDPVQL 58

Query: 65  DDA-EVVVVSSAIKRDNPELMAARAKRLPVVRRAEMLAE-LMRLKSCVSIAGTHGKTTTT 122
           +   ++VV+ +A+ R NP +       L      + L + L+  +  ++++GTHGKTTT+
Sbjct: 59  EPKPDLVVIGNAMSRGNPCVEYVLNHNLRYTSGPQWLQDFLLHDRWVIAVSGTHGKTTTS 118

Query: 123 SLVATLLDAGNFDPTVINGGIINAYGTNARLGDGNWMVVEADESDGTFLKLPTE------ 176
           S++A +L+   + P  + GG++  +G +ARLG+  + VVEADE D  F    ++      
Sbjct: 119 SMIAWVLEHCGYQPGFLVGGVLGNFGISARLGESMFFVVEADEYDSAFFDKRSKFVHYHP 178

Query: 177 -VAIVTNVDPEHLDHFKTFDKVQEAFKAFVENVPFYGFAVMCIDHPVVQALVGRIEDRRV 235
              ++ N++ +H D F   + ++  F   V  VP  G  +       +  ++ R      
Sbjct: 179 RTLVMNNLEFDHADIFDNLEAIKRQFHHLVRTVPGNGRILAPKQDEALADVLQRGCWSET 238

Query: 236 ITYGENPQADVRLVDVDLKGGVTKFGVVFRNRAGETVHEIRGLRLPMPGKHNALNATAAI 295
              GE  +     +  D     ++F V+ +   GE V ++      + G HN  NA  AI
Sbjct: 239 EFSGEQGEWQAEKITAD----GSQFHVLLK---GERVGQV---NWSLVGDHNVSNALMAI 288

Query: 296 AVAHELKVPDEKIIEAISQFGGVKRRFTRTGEWNGVTVYDDYGHHPVEIAAVLKAAR-AA 354
           A A  + V  E   EA+  F   KRR    GE NGVTVYDD+ HHP  I   L   R   
Sbjct: 289 AAARHVGVAPELACEALGLFVNTKRRLELKGEINGVTVYDDFAHHPTAIELTLGGLRNKV 348

Query: 355 SDGQVIAVVQPHRYTRLASLFDE-FCTCFNDADHVVVAPVYTAGEAPIPGVDRDHLVQGL 413
            D ++IAV++P   T    +  E      + AD V    +Y     P         V+ +
Sbjct: 349 GDKKIIAVLEPRSATMKLGVHKETLAASLHSADSVY---LYQPSNIP-------WSVEEV 398

Query: 414 IAHGHRSVTALEGPEQLAGIVAGLAKPGDYVICLGAGSISGWAYALPAELQ 464
                +        ++   ++A  A+ GD ++ +  G   G    L A LQ
Sbjct: 399 AKQCQQPAQVSANMDEFVAMIAKEAQAGDQILVMSNGGFEGIHGKLLAALQ 449