Pairwise Alignments

Query, 343 a.a., Spermidine/putrescine-binding periplasmic protein from Xanthobacter sp. DMC5

Subject, 357 a.a., ABC transporter substrate-binding protein from Sinorhizobium meliloti 1021

 Score = 73.2 bits (178), Expect = 1e-17
 Identities = 83/310 (26%), Positives = 132/310 (42%), Gaps = 40/310 (12%)

Query: 4   KIVALGLALAAFVAGPASAAEKLVVSTWGGSFRDLIAEAIASKFTKDTGVEVEYITGGTI 63
           K    GL     ++ PA  AEK+++++ GG++   + EA    FTK TG+EV      T+
Sbjct: 13  KTAIAGLLSLLPISLPALGAEKVIIASTGGAYDKALREAWFDPFTKATGIEVV-----TV 67

Query: 64  DRLNKAKLAKGSPESDITFTTAHVGW-LYANDDLFE--------TLDLSKMPNASKLVPQ 114
              N    AK +        T +V W LY + ++          T DL++          
Sbjct: 68  AATNSEMRAKAA----AMVKTGNVNWDLYLDGEIQAASKAHRKVTEDLTEFCRQFADRED 123

Query: 115 AKVSPYHIG-------AWAYVYTIGYRPDLTPKNINFSSWADLWNP-ELKGMLAAPDFDP 166
             V+    G       A    Y  G   D  P     ++WAD+W+  +  G  A P+FD 
Sbjct: 124 LSVNACSAGGALLQSTATLLAYRTGKHGDSVP-----ATWADMWDTRKFPGERAFPNFDD 178

Query: 167 SHIIAVSALLAGG------SPADWQKGEQKLLALKPNFKAFYTNDANSQQLIATGETPVQ 220
              +  +ALLA G       P D  +   KL  +KP+   ++     S Q    GE  + 
Sbjct: 179 PWRVMAAALLADGVTRDELFPLDIDRALAKLDQIKPSVSLWWKTGDQSVQGFRNGEYSLG 238

Query: 221 IMLSMNAYYMIAQGVPIKLVIPKEGGVLGIDTMAIMKGSKNRELAEKFINTALD-PEVQG 279
            +    A  M ++G+PI     K   ++G D +A++KG+ +R+ A K I   L+ P  Q 
Sbjct: 239 QIWLTRAKAMQSEGLPIAWSY-KAAFLVG-DRIALLKGAPHRDNALKLITFWLNSPAAQA 296

Query: 280 KIAELKKGSP 289
           K  E+   +P
Sbjct: 297 KACEVLSCTP 306