Pairwise Alignments

Query, 280 a.a., Inner membrane ABC transporter permease protein YdcV from Xanthobacter sp. DMC5

Subject, 264 a.a., Binding-protein-dependent transport systems inner membrane component from Pseudomonas syringae pv. syringae B728a

 Score =  184 bits (466), Expect = 2e-51
 Identities = 98/251 (39%), Positives = 146/251 (58%)

Query: 28  LVVAFIILPAVVVGISAFNDRAILSFPPQAWSTRWFARAFSYRDFSEGFRNGLIITAFAS 87
           LVV F++ P VVV + AF     LS P   +S RWF   F   DF + F N LI+   ++
Sbjct: 14  LVVIFMMAPLVVVCLVAFTPENTLSLPTTHFSLRWFKAVFERADFIDSFYNSLILAFVSA 73

Query: 88  SIALVVGAGFAFALDRYSFRGKMALEAVLTSPLVIPHFTIGLGFLILAAQIHATRTFALV 147
           ++A ++    A A+ R++F G+    A+  SP++IPH  +G+  L L A +    +F  +
Sbjct: 74  TLATLIAVPAALAITRHTFPGRNFFNALFLSPIIIPHLVLGVAMLRLFALMGVNGSFTWL 133

Query: 148 IVCHVVLVLPFVMRSVYVSLRNLDSRLELAAASLGARPGRALFTVTLPLLIPGLFSGWLF 207
           I  HV+++ P+V+R V  +   +D   E AA SLGA        +TLP+++PG+  GWL 
Sbjct: 134 IFAHVLVITPYVLRLVLAAAIGIDRSAEHAAESLGADRFTLFRQITLPMILPGVAGGWLL 193

Query: 208 AAILSFNEFTASLFVTAQATQTLPVAMYNYVREYADPTLAALSVIYIVVTALVLTIANAF 267
           A I SF+E T S+FVT+ ATQTLPV MY Y  E  DP +AA+S + I +TA  + + +  
Sbjct: 194 AFINSFDEVTLSIFVTSPATQTLPVRMYVYATESIDPMMAAVSALVIALTAATMILLDRV 253

Query: 268 LGLGKVLNVEH 278
            GL +VL  +H
Sbjct: 254 YGLDRVLVGKH 264