Pairwise Alignments

Query, 280 a.a., Inner membrane ABC transporter permease protein YdcV from Xanthobacter sp. DMC5

Subject, 264 a.a., ABC transporter permease from Sinorhizobium meliloti 1021

 Score =  135 bits (339), Expect = 1e-36
 Identities = 81/246 (32%), Positives = 132/246 (53%), Gaps = 1/246 (0%)

Query: 29  VVAFIILPAVVVGISAFNDRAILSFPPQAWSTRWFARAFSYRDFSEGFRNGLIITAFASS 88
           ++AF+I P  V  I A N R  +  PP  ++  WF  A+S + F  G    L++   A+ 
Sbjct: 18  MMAFLIFPIAVTLIVAVNPREFV-LPPNGFTLDWFRAAWSSKTFLRGMGVSLVLGLAAAL 76

Query: 89  IALVVGAGFAFALDRYSFRGKMALEAVLTSPLVIPHFTIGLGFLILAAQIHATRTFALVI 148
           IA  +    A AL R +F GK A+  +L +PL+IP   + L   I   ++        ++
Sbjct: 77  IANALALPAAIALARTNFPGKGAINLILMTPLLIPTTILSLALYIYFVRVGYGSGLVPLL 136

Query: 149 VCHVVLVLPFVMRSVYVSLRNLDSRLELAAASLGARPGRALFTVTLPLLIPGLFSGWLFA 208
           V H + ++P+ +R +  SL N D   E AA ++GA   R LF+VTLP++  GL S     
Sbjct: 137 VGHAIHIMPYAVRILTASLLNFDPSYEEAARNVGAGRIRTLFSVTLPVIRTGLISSLTLC 196

Query: 209 AILSFNEFTASLFVTAQATQTLPVAMYNYVREYADPTLAALSVIYIVVTALVLTIANAFL 268
            ILS+N+F  S+F+   +   LPV +Y+Y++   D   AAL+   I+++A+ + + +   
Sbjct: 197 FILSWNDFPISVFLAPPSWTPLPVELYSYIKFQYDAVAAALASSLILLSAVAMVVIDRLA 256

Query: 269 GLGKVL 274
           GL +VL
Sbjct: 257 GLRRVL 262