Pairwise Alignments

Query, 280 a.a., Inner membrane ABC transporter permease protein YdcV from Xanthobacter sp. DMC5

Subject, 266 a.a., ABC transporter permease from Sinorhizobium meliloti 1021

 Score =  139 bits (349), Expect = 9e-38
 Identities = 79/257 (30%), Positives = 129/257 (50%)

Query: 14  GERLLAIAGWSAVWLVVAFIILPAVVVGISAFNDRAILSFPPQAWSTRWFARAFSYRDFS 73
           G +  +   W+ V   +  +  P VVV  ++F    I++FPP   S +W+       D  
Sbjct: 3   GSKSKSFVLWAFVTTALLMLSAPTVVVLGASFTAGNIITFPPDGLSLKWYGAIAQASDLR 62

Query: 74  EGFRNGLIITAFASSIALVVGAGFAFALDRYSFRGKMALEAVLTSPLVIPHFTIGLGFLI 133
           + F   LI+    + +++ VG     AL +Y  R   +++  L  P  IP    G+G ++
Sbjct: 63  QAFVRSLIVATICTLVSIPVGTLAGIALAKYRVRFARSIQIYLLLPFTIPLIGSGIGMML 122

Query: 134 LAAQIHATRTFALVIVCHVVLVLPFVMRSVYVSLRNLDSRLELAAASLGARPGRALFTVT 193
           +   +        V +   V+ LPF++ +V  S  NL   LELAAA+ GA P +    +T
Sbjct: 123 VLGNMGVLGKLWPVGIACAVINLPFMIWAVTASASNLSPDLELAAANCGAPPLQRFLYIT 182

Query: 194 LPLLIPGLFSGWLFAAILSFNEFTASLFVTAQATQTLPVAMYNYVREYADPTLAALSVIY 253
           LP ++PG+ +G L   IL+ NEF  SL +    + TLPV +YN +R    P LAA+SV++
Sbjct: 183 LPAVLPGVITGSLLMFILALNEFLVSLLLVDARSVTLPVQIYNSIRSIITPDLAAISVVF 242

Query: 254 IVVTALVLTIANAFLGL 270
           I    L + + +  +GL
Sbjct: 243 IACAGLAIALLDRLVGL 259