Pairwise Alignments

Query, 280 a.a., Inner membrane ABC transporter permease protein YdcV from Xanthobacter sp. DMC5

Subject, 271 a.a., putrescine transport system permease protein PotI from Phaeobacter inhibens DSM 17395

 Score =  109 bits (273), Expect = 6e-29
 Identities = 70/236 (29%), Positives = 113/236 (47%), Gaps = 2/236 (0%)

Query: 31  AFIILPAVVVGISAFNDRAILSFPPQAWSTRWFARAFSYRDFSEGFRNGLIITAFASSIA 90
           AF+ +P V++ I +FN+  +++     +S +W+        F       L +   +S+IA
Sbjct: 17  AFLYIPMVILIIFSFNESKLVTVWA-GFSVKWYGELLQNEAFLNAAWVTLKVAVMSSTIA 75

Query: 91  LVVGAGFAFALDRYS-FRGKMALEAVLTSPLVIPHFTIGLGFLILAAQIHATRTFALVIV 149
            V+G   A+ L R   F G+     ++ +PLV+P    GL  L+L   I   R    +++
Sbjct: 76  TVLGTMAAYVLVRGGRFLGRTLFSGMIYAPLVMPEVITGLSLLLLFIGIGLDRGVMTIVL 135

Query: 150 CHVVLVLPFVMRSVYVSLRNLDSRLELAAASLGARPGRALFTVTLPLLIPGLFSGWLFAA 209
            H    + +V   V   L   D  LE AA  LG     A   VTLP++ P + SGWL A 
Sbjct: 136 AHTTFSMCYVSVVVSSRLVTFDRSLEEAALDLGCSAAEAFRLVTLPIIAPAVISGWLLAF 195

Query: 210 ILSFNEFTASLFVTAQATQTLPVAMYNYVREYADPTLAALSVIYIVVTALVLTIAN 265
            LS ++   + F +  A  TLP+ +++ VR    P + ALS I I +  L +  A+
Sbjct: 196 TLSLDDLVIASFTSGPAATTLPIKIFSAVRLGVSPEINALSTIMIAIVTLGVVTAS 251