Pairwise Alignments

Query, 385 a.a., Spermidine/putrescine import ATP-binding protein PotA from Xanthobacter sp. DMC5

Subject, 374 a.a., Putrescine transport ATP-binding protein PotA (TC 3.A.1.11.1) from Pseudomonas fluorescens FW300-N1B4

 Score =  278 bits (710), Expect = 2e-79
 Identities = 152/317 (47%), Positives = 204/317 (64%), Gaps = 6/317 (1%)

Query: 30  VQIDGVTKRF-GDATALHEAWLKIADGEFMTLLGPSGCGKTTLLNLIAGFLEADGGEIFV 88
           V   GV K + G+   + +  L I  GEF+TLLGPSG GKTT L ++AGF     GEI +
Sbjct: 15  VSFRGVQKSYDGENLIVKDLNLDIRKGEFLTLLGPSGSGKTTSLMMLAGFETPTAGEIQL 74

Query: 89  GGRLMTETAPYDREIGVVFQNYALFPHMNVAKNVGYGLRMRGVAKSEIETRVAEALALVK 148
            GR +    P+ R+IG+VFQNYALFPHM VA+N+ + L +RG+ K+++  RV   L++V+
Sbjct: 75  AGRSINNVPPHKRDIGMVFQNYALFPHMTVAENLAFPLTVRGLNKNDVSDRVKRVLSMVQ 134

Query: 149 LDGFGERKPRQLSGGQQQRVALARALVIRPKVLLLDEPFSALDKNLRGAMQVELKEIQRR 208
           LD F +R P QLSGGQQQRVALARALV  P+++L+DEP  ALDK LR  MQ+E+K + +R
Sbjct: 135 LDTFAQRYPAQLSGGQQQRVALARALVFEPQLVLMDEPLGALDKQLREHMQMEIKHLHQR 194

Query: 209 LGVTTIFVTHDQSEALSMSDRIAVMSQGRIRQVGTPDEIYRRPLDPFVASFVGDVNVLPG 268
           LGVT ++VTHDQ EAL+MSDR+AV  QG I+Q+  P  +Y  P + FVA+F+G+ N L G
Sbjct: 195 LGVTVVYVTHDQGEALTMSDRVAVFHQGEIQQIAPPRSLYEEPKNTFVANFIGENNRLNG 254

Query: 269 RLERRIGETATVLIAEGRLSVSADTLEGIAPGAAVDLFVRPDAVRI-AEGEGLV---SGT 324
           RL    G+   V +  G   V A  +     G  V L +RP+ V +    E  V   SG 
Sbjct: 255 RLHSHTGDRCVVELGRGE-KVEALAVNVGKTGEPVTLSIRPERVSLNGSSESCVNRFSGR 313

Query: 325 VATHVYQGSHVDVLVDV 341
           VA  +Y G HV V ++V
Sbjct: 314 VAEFIYLGDHVRVRLEV 330