Pairwise Alignments

Query, 385 a.a., Spermidine/putrescine import ATP-binding protein PotA from Xanthobacter sp. DMC5

Subject, 377 a.a., spermidine/putrescine ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

 Score =  275 bits (703), Expect = 2e-78
 Identities = 153/317 (48%), Positives = 209/317 (65%), Gaps = 7/317 (2%)

Query: 30  VQIDGVTKRFGDATALHEAWLKIADGEFMTLLGPSGCGKTTLLNLIAGFLEADGGEIFVG 89
           +++ G++K F     +    L +  GEF+T+LGPSGCGKTT+L +IAGF  AD G+I + 
Sbjct: 18  IRLSGISKSFDGKEIIGNLNLDVNHGEFLTILGPSGCGKTTVLRMIAGFETADQGQILLD 77

Query: 90  GRLMTETAPYDREIGVVFQNYALFPHMNVAKNVGYGLRMRGVAKSEIETRVAEALALVKL 149
            + +T+     R +  VFQ+YALFPHM V +NV +GLRM+ V +SEIE RV EAL +V+L
Sbjct: 78  DQDVTQVPAEQRHVNTVFQSYALFPHMTVFENVAFGLRMQKVPQSEIEPRVMEALRMVRL 137

Query: 150 DGFGERKPRQLSGGQQQRVALARALVIRPKVLLLDEPFSALDKNLRGAMQVELKEIQRRL 209
               +RKP QLSGGQQQR+A+ARA+V +PKVLLLDE  SALD  LR  MQ ELK++QR+L
Sbjct: 138 AEMAQRKPHQLSGGQQQRIAIARAVVNKPKVLLLDESLSALDYKLRKQMQSELKQLQRQL 197

Query: 210 GVTTIFVTHDQSEALSMSDRIAVMSQGRIRQVGTPDEIYRRPLDPFVASFVGDVNVLPGR 269
           G+T IFVTHDQ EALSMSDRI VM  G+I Q G+P EIY  P + FVA F+G++NV    
Sbjct: 198 GITFIFVTHDQEEALSMSDRIIVMRSGKIEQDGSPREIYEDPKNLFVARFIGEINVFQAT 257

Query: 270 LERRIGETATVLIAEGRLSVSADTLEGIAPGAAVDLFVRPDAVRI-----AEGEGLVSGT 324
              RI E    +  EG  S+     E +  G  + + +RP+ +RI     +E +G+V G 
Sbjct: 258 TIDRIDEKRIRVDIEGIESIVYYEDE-VKAGDKLQVLLRPEDLRIEEIKESEEKGIV-GH 315

Query: 325 VATHVYQGSHVDVLVDV 341
           V    Y+G  ++ +V++
Sbjct: 316 VTDRTYKGMTLESVVEL 332