Pairwise Alignments

Query, 609 a.a., ABC transporter ATP-binding protein uup from Xanthobacter sp. DMC5

Subject, 554 a.a., ABC transporter from Pseudomonas syringae pv. syringae B728a

 Score =  268 bits (685), Expect = 5e-76
 Identities = 174/517 (33%), Positives = 261/517 (50%), Gaps = 45/517 (8%)

Query: 20  LLDGAELSVSAGERVCLVGRNGSGKSTLLKVAAGLVEPDSGTRFFQPGTTVRYLQQEPDF 79
           +L    LS   G ++ ++G NGSGKSTLLK+ AG+     G     P   V YL QEP  
Sbjct: 21  ILKNISLSFFPGAKIGVLGLNGSGKSTLLKIMAGVDTEFDGEARPMPELNVGYLPQEPQL 80

Query: 80  SGYATTLAYVEAGLGPGDDAYR------AQYL------------LTELGLTGQEDPAH-- 119
               T    VE  +    DA        A+Y               +L    Q    H  
Sbjct: 81  DPNKTVREVVEEAVSVIKDAQARLDQVYAEYAEPDADFDKLAAEQAKLESILQASDGHNL 140

Query: 120 ----------------------LSGGEARRAALARVIAPEPDVLLLDEPTNHLDLPAIEW 157
                                 LSGGE RR AL R++   PD+LLLDEPTNHLD  ++ W
Sbjct: 141 ERQLEVAADALRLPAWDAKVSVLSGGEKRRVALCRLLLSAPDMLLLDEPTNHLDADSVAW 200

Query: 158 LESELKGLKSAMVLISHDRRFLETLSRATVWLDRGQTRRLEQGFGAFEAWRDEVLEQEET 217
           LE  L      +V I+HDR FL+ ++   + LDRG     E  +  +   + + L QE  
Sbjct: 201 LEHFLHDFPGTVVAITHDRYFLDNVAGWILELDRGAGIPYEGNYSGWLEAKSDRLAQESK 260

Query: 218 ERHKLDRKIVAELDWLRYGVTARRKRNVRRLGLLHSMRKDRRDERRAVGNVKLAVSEAEA 277
           ++   ++ +  EL+W+R G  AR+ ++  RL     M+     +R      ++ +     
Sbjct: 261 QQTAHEKAMKDELEWVRKGAKARQSKSKARLQRFEEMQSQEFQKRSETN--EIYIPAGPR 318

Query: 278 SGKLVIEAKHIAKAFGEREVVKDFSTRILRGDRIGIIGPNGAGKTTLIKLLTGELAPDSG 337
            G  VIE K++ K +G+R ++ + S  + +G  +G+IG NGAGK+TL ++L G+  PDSG
Sbjct: 319 LGDKVIEFKNVTKGYGDRVLIDNLSFSMPKGAIVGVIGGNGAGKSTLFRMLMGKEQPDSG 378

Query: 338 TVKLGTNLEVASLDQKRAALDPGTTLRDALTGGGSDQVQVGGAPKHVMGYLKDFLFTPEQ 397
           ++++G  +++A +DQ R  LD   ++  A++  GSD +++G        Y+  F F    
Sbjct: 379 SIEVGETVQLACVDQSRDDLDGSKSVFQAVS-DGSDVIRIGNYEIPSRTYVGRFNFKGGD 437

Query: 398 ANAPLSVLSGGERGRLMLARALALPSNVLVLDEPTNDLDLETLDLLQEMVADYPGTVILV 457
               +  LSGGERGRL LA  L    NVL+LDEP+NDLD+ETL  L+E + D+PG  I++
Sbjct: 438 QQKFVKDLSGGERGRLHLALTLKEGGNVLLLDEPSNDLDVETLRSLEEALLDFPGAAIVI 497

Query: 458 SHDRDFLDRTVSSVIMAEGDGVFREYAGGYSDMLSQR 494
           SHDR FLDR  + ++  E D     + G Y++  + R
Sbjct: 498 SHDRWFLDRVATHILAYEDDSQAIFFEGNYTEYEADR 534



 Score =  105 bits (261), Expect = 7e-27
 Identities = 82/282 (29%), Positives = 127/282 (45%), Gaps = 39/282 (13%)

Query: 294 EREVVKDFSTRILRGDRIGIIGPNGAGKTTLIKLLTGELAPDSGTVKLGTNLEVASLDQK 353
           +RE++K+ S     G +IG++G NG+GK+TL+K++ G      G  +    L V  L Q+
Sbjct: 18  KREILKNISLSFFPGAKIGVLGLNGSGKSTLLKIMAGVDTEFDGEARPMPELNVGYLPQE 77

Query: 354 RAALDPGTTLRDALTGGGS---------DQVQVGGAPKHV--------MGYLKDFLFTPE 396
              LDP  T+R+ +    S         DQV    A               L+  L   +
Sbjct: 78  -PQLDPNKTVREVVEEAVSVIKDAQARLDQVYAEYAEPDADFDKLAAEQAKLESILQASD 136

Query: 397 QAN------------------APLSVLSGGERGRLMLARALALPSNVLVLDEPTNDLDLE 438
             N                  A +SVLSGGE+ R+ L R L    ++L+LDEPTN LD +
Sbjct: 137 GHNLERQLEVAADALRLPAWDAKVSVLSGGEKRRVALCRLLLSAPDMLLLDEPTNHLDAD 196

Query: 439 TLDLLQEMVADYPGTVILVSHDRDFLDRTVSSVI-MAEGDGVFREYAGGYSDMLSQRGRG 497
           ++  L+  + D+PGTV+ ++HDR FLD     ++ +  G G+   Y G YS  L  +   
Sbjct: 197 SVAWLEHFLHDFPGTVVAITHDRYFLDNVAGWILELDRGAGI--PYEGNYSGWLEAKSDR 254

Query: 498 VEARDKSAPAAKAKGGEQKPDAGKGTGGAAAGGKRRLSFHEQ 539
           +    K   A +    ++     KG     +  K RL   E+
Sbjct: 255 LAQESKQQTAHEKAMKDELEWVRKGAKARQSKSKARLQRFEE 296



 Score = 88.6 bits (218), Expect = 6e-22
 Identities = 69/224 (30%), Positives = 107/224 (47%), Gaps = 12/224 (5%)

Query: 15  FGATPLLDGAELSVSAGERVCLVGRNGSGKSTLLKVAAGLVEPDSGTRFFQPGTTVRYL- 73
           +G   L+D    S+  G  V ++G NG+GKSTL ++  G  +PDSG+   + G TV+   
Sbjct: 333 YGDRVLIDNLSFSMPKGAIVGVIGGNGAGKSTLFRMLMGKEQPDSGS--IEVGETVQLAC 390

Query: 74  --QQEPDFSGYATTLAYVEAG---LGPGDDAYRAQYLLTELGLTG---QEDPAHLSGGEA 125
             Q   D  G  +    V  G   +  G+    ++  +      G   Q+    LSGGE 
Sbjct: 391 VDQSRDDLDGSKSVFQAVSDGSDVIRIGNYEIPSRTYVGRFNFKGGDQQKFVKDLSGGER 450

Query: 126 RRAALARVIAPEPDVLLLDEPTNHLDLPAIEWLESELKGLKSAMVLISHDRRFLETL-SR 184
            R  LA  +    +VLLLDEP+N LD+  +  LE  L     A ++ISHDR FL+ + + 
Sbjct: 451 GRLHLALTLKEGGNVLLLDEPSNDLDVETLRSLEEALLDFPGAAIVISHDRWFLDRVATH 510

Query: 185 ATVWLDRGQTRRLEQGFGAFEAWRDEVLEQEETERHKLDRKIVA 228
              + D  Q    E  +  +EA R + L +   + H++  K +A
Sbjct: 511 ILAYEDDSQAIFFEGNYTEYEADRKKRLGEAAAQPHRVRHKKLA 554



 Score = 26.6 bits (57), Expect = 0.003
 Identities = 19/59 (32%), Positives = 33/59 (55%), Gaps = 8/59 (13%)

Query: 551 DLRANLEKLAAEIADPALYARDPARFDKASAALAETQAALDAAEEEWL--RLEILKEEL 607
           D +A L+++ AE A+P       A FDK +A  A+ ++ L A++   L  +LE+  + L
Sbjct: 99  DAQARLDQVYAEYAEP------DADFDKLAAEQAKLESILQASDGHNLERQLEVAADAL 151