Pairwise Alignments

Query, 601 a.a., hypothetical protein from Xanthobacter sp. DMC5

Subject, 463 a.a., permease from Sinorhizobium meliloti 1021

 Score =  108 bits (269), Expect = 6e-28
 Identities = 121/462 (26%), Positives = 196/462 (42%), Gaps = 43/462 (9%)

Query: 52  PPAALIPLAAQHAMLAVTFLI-YPVLAATEAKLPADQISAMVSACAMSIGVATIIQCMRT 110
           P   L  L  QH ++     I  P++  +   L  DQI+ ++SA     G+ T+IQC+  
Sbjct: 15  PAPKLAALGLQHVLVMYAGAIAVPLIIGSALNLSKDQIAMLISADLFCCGIVTLIQCLGV 74

Query: 111 ---------RFGSGYLAVH-IPAPGAIPLAVQALALGGLGLMATTTLLVGIAQLFIARLV 160
                      G G+ AV  I A G  P       LG +      TLL   A  + +R V
Sbjct: 75  WNVGARLPIMMGIGFTAVPPIIATGTDPDLGMPGVLGAVIASGVFTLL---AAPYFSRWV 131

Query: 161 RPLRVLLPPEVCGVAVSMLGVSL----------ASPALRRALGLDHGPMVEENAVLSSLA 210
           R      P  V G  + ++G+SL            P ++   GL   P   E   L+  A
Sbjct: 132 R----FFPAVVTGTVMLVIGLSLMRVGVNWAAGGQPMIKGPDGLIPNPAYGEPFALAVAA 187

Query: 211 TVGI-IVAITVFAPRRLKLFAVFAGASIGWIVALSLGAGRPEAPDAIAAAPLLALPTLTL 269
            V + I+ +T F    L   AV  G  IG+ +A++ G    +    +A A  + + T   
Sbjct: 188 IVLVSILLMTRFLKGFLANLAVLFGIGIGFAIAVAFGKVDFQG---VADASWVTVVT--- 241

Query: 270 PSFQFAPALFPLMALLVVMNLVDVLSV--TVSLEKMNDADWRRAHMPAAQRAVTACGIGN 327
             F F   +F L A + +  ++ V+ +  T  +  + D   R        R +   G+GN
Sbjct: 242 -PFAFGMPIFDLWATVALCTVMIVMMIEATGQILAVGDMAGRTISEADLARGLRTDGLGN 300

Query: 328 ILNGLTSGFQSGLSSSSVGLAFATQSTARVIGFTAGIMIFAIAFVPKAIVALTLIPSPVI 387
           I+ G+ + F     + +VGL   T   +R      G+++  +  +PK       IPS V+
Sbjct: 301 IIGGIFNTFTYTTYAQNVGLLQITGVMSRWAVAAGGVVLILLGCLPKIAFITASIPSYVV 360

Query: 388 GGILLYTSAYLVVAGMDLVTSRRL--SERRVFVVGLSV-LAGLSVALLPITRQLPLMLQP 444
           GG  +     +   G+ ++       + R +++V +SV LA + V    I  QLP  +  
Sbjct: 361 GGAAIVMFGMVSATGVKILARVNFVDNRRNLYIVAVSVGLAMIPVVADKIFAQLPEFIDR 420

Query: 445 LFSTPLTVGALSAIMLNLLFRIGIAQEAVEE--VPEGAHAFP 484
            F + + VG  SA++LNLLF     +E V+   + EGA   P
Sbjct: 421 FFHSGVLVGTFSAVLLNLLFNGVPPREEVQPDLLGEGAMRHP 462