Pairwise Alignments

Query, 261 a.a., 3-deoxy-manno-octulosonate cytidylyltransferase from Xanthobacter sp. DMC5

Subject, 245 a.a., 3-deoxy-manno-octulosonate cytidylyltransferase (RefSeq) from Shewanella loihica PV-4

 Score =  157 bits (398), Expect = 2e-43
 Identities = 109/247 (44%), Positives = 140/247 (56%), Gaps = 14/247 (5%)

Query: 20  VLVLIPARMAATRLPGKPLADVGGRPMIVEVARRA-VAAGIGRVAVATDAPEIAAAVTAA 78
           V +LIPAR  ++R PGKPLA + G+PMI  V  RA +A G+  + VATD   I  AV A 
Sbjct: 3   VTLLIPARYGSSRFPGKPLAPINGKPMIQHVYERAALAKGLTAIYVATDDLRIKEAVEAF 62

Query: 79  GLEAVMTRSDHPSGSDRIFEALTTLDPVGEVEIVVNVQGDLPTILPNTIRTALIPLLETS 138
           G + VMT ++  SG+DRI +A+T L  + + ++V+N+QGD P I P +I   +I L E  
Sbjct: 63  GGKVVMTDANAASGTDRIEDAITQLG-LADDDLVINLQGDQPLIDPISIEQ-IITLFERH 120

Query: 139 AD---IATLAAEITLAEERTDPNVVKVVGSPLAPGLLRALYFTRATAPFGEG----PLYH 191
                +ATL  EIT   E  DP  VK+V          ALYF+RA  PFG      P+Y 
Sbjct: 121 PGEFGMATLGYEITEEHELNDPKHVKMVFD----NQFNALYFSRARIPFGRDTDDYPVYK 176

Query: 192 HIGLYAYRRAALERFVSLPPSPLEKREKLEQLRALEAGMRIDVAVVDAVPLGVDTPSHLE 251
           H+G+YAY R  +  F  LP   LE  EKLEQLRALE G  I VA+       VDTP  + 
Sbjct: 177 HLGVYAYTREFVRTFNKLPLGRLEDLEKLEQLRALEHGHTIKVAISAFDSPEVDTPEDIR 236

Query: 252 RARALLA 258
              A LA
Sbjct: 237 ICEARLA 243