Pairwise Alignments

Query, 544 a.a., putative ABC transporter ATP-binding protein YejF from Xanthobacter sp. DMC5

Subject, 548 a.a., oligopeptide ABC transporter ATP-binding protein from Sinorhizobium meliloti 1021

 Score =  487 bits (1254), Expect = e-142
 Identities = 268/538 (49%), Positives = 358/538 (66%), Gaps = 18/538 (3%)

Query: 1   MTTPLLSVRDLSVAFRRGDGAPPALAVKTVSFELAKGETLALVGESGSGKSVTALSVLKL 60
           M   LL VR+LSV F    G     AVK++S+ L KGETLA++GESGSGKSV++ +++ L
Sbjct: 1   MAEHLLEVRNLSVEFHTAAGV--VHAVKSISYHLDKGETLAILGESGSGKSVSSSAIMNL 58

Query: 61  LPYPSASHPSGEILFKGRDLLTVSERELRGIRGNNITMVFQEPMSSLNPLHTIERQVGEM 120
           +  P     SGEIL  GRDLLT+   E R + G  + M+FQ+P+S LNP++++  Q+ E 
Sbjct: 59  IDMPPGRISSGEILLDGRDLLTMPAEERREVNGRRVAMIFQDPLSHLNPVYSVGWQISEA 118

Query: 121 LILHRGMSAHAARARTLELLAEVGIPQPEERLSAYPHQLSGGQRQRVMIAMALANEPDLL 180
           +  H G++   AR   L LL  VGIP+PE  +  YPH+ SGGQRQRVMIAMALA  PDLL
Sbjct: 119 MTTH-GLAGSKAREEALRLLRRVGIPEPERAMRKYPHEFSGGQRQRVMIAMALALRPDLL 177

Query: 181 IADEPTTALDVTVQAQILKLLKELQARLGMAMLFITHDLGIVRKIADRVCVMQKGEIVEQ 240
           IADEPTTALDVTVQA++LKLLKELQ   GMA+L ITHDLG+V +IADRV VM+KG IVE 
Sbjct: 178 IADEPTTALDVTVQAEVLKLLKELQRETGMAVLIITHDLGVVSEIADRVVVMEKGAIVEA 237

Query: 241 GGAEETFQHPRHPYTQALLKAEPKPDP--APIAPDAPLVMEANDLKVYFPIKRGILRKTV 298
           G   E +++P+HPYTQ L+ A P       P A   PL+   +            +RKT 
Sbjct: 238 GTVREIYKNPQHPYTQKLIAAAPGKGAMHEPGARAEPLLSVRD------------VRKTY 285

Query: 299 GHVKAVDGVSIAIRRGETLGVVGESGSGKTTLGLALLRLIS-SAGPIAFLGKPIDALSFK 357
           G  +A+ G+S  +  GET+ VVGESGSGK+TL  ALLRL    +G   + G+ + ALS  
Sbjct: 286 GSFEALKGISFDLMPGETMAVVGESGSGKSTLARALLRLDEPDSGTALWKGRDLFALSPA 345

Query: 358 AMRPLRSDLQIVFQDPFGALSPRMSVAEIVGEGLLVHQRQLSADERDARVVAALADVGLD 417
            +  LR DLQ+VFQDP  +L+PRM+V +++ E  ++H   L   +   RV   L  VGL 
Sbjct: 346 ELYKLRRDLQMVFQDPTQSLNPRMTVYQLISEAWVIHPDILPKAKWRERVAELLVQVGLS 405

Query: 418 PETRHRYPHEFSGGQRQRISIARAMALEPSFVVLDEPTSALDMIVQAQIVDLLRALQKKR 477
            E   RYPH+FSGGQRQRI+IARA+ALEP  ++ DE  SALD+ VQAQ+++LL  L+++ 
Sbjct: 406 AEHMSRYPHQFSGGQRQRIAIARALALEPQLIICDEAVSALDVSVQAQVIELLDRLRREM 465

Query: 478 DLTFMFISHDLRVVSALASRILVMRNGKMVEEGPAHDVFEHPKEDYTRALFAAAFNLD 535
            + F+FI+HDL VV   A  ++VM+ G++VE G   +VF+ P++ YTRAL AA+ + D
Sbjct: 466 GIAFIFIAHDLPVVRDFADYVMVMQQGEVVELGTVREVFDTPRQAYTRALLAASLSPD 523



 Score =  221 bits (562), Expect = 7e-62
 Identities = 133/284 (46%), Positives = 177/284 (62%), Gaps = 16/284 (5%)

Query: 4   PLLSVRDLSVAFRRGDGAPPALAVKTVSFELAKGETLALVGESGSGKSVTALSVLKLLPY 63
           PLLSVRD+   +   +      A+K +SF+L  GET+A+VGESGSGKS  A ++L+L   
Sbjct: 274 PLLSVRDVRKTYGSFE------ALKGISFDLMPGETMAVVGESGSGKSTLARALLRL--- 324

Query: 64  PSASHPSGEILFKGRDLLTVSERELRGIRGNNITMVFQEPMSSLNPLHTIERQVGEMLIL 123
                 SG  L+KGRDL  +S  EL  +R  ++ MVFQ+P  SLNP  T+ + + E  ++
Sbjct: 325 --DEPDSGTALWKGRDLFALSPAELYKLR-RDLQMVFQDPTQSLNPRMTVYQLISEAWVI 381

Query: 124 HRGMSAHAA-RARTLELLAEVGIPQPEERLSAYPHQLSGGQRQRVMIAMALANEPDLLIA 182
           H  +   A  R R  ELL +VG+    E +S YPHQ SGGQRQR+ IA ALA EP L+I 
Sbjct: 382 HPDILPKAKWRERVAELLVQVGLSA--EHMSRYPHQFSGGQRQRIAIARALALEPQLIIC 439

Query: 183 DEPTTALDVTVQAQILKLLKELQARLGMAMLFITHDLGIVRKIADRVCVMQKGEIVEQGG 242
           DE  +ALDV+VQAQ+++LL  L+  +G+A +FI HDL +VR  AD V VMQ+GE+VE G 
Sbjct: 440 DEAVSALDVSVQAQVIELLDRLRREMGIAFIFIAHDLPVVRDFADYVMVMQQGEVVELGT 499

Query: 243 AEETFQHPRHPYTQALLKAEPKPDP-APIAPDAPLVMEANDLKV 285
             E F  PR  YT+ALL A   PDP A     A +  EA D+ +
Sbjct: 500 VREVFDTPRQAYTRALLAASLSPDPDAKAGHLASVPAEAADILI 543