Pairwise Alignments

Query, 544 a.a., putative ABC transporter ATP-binding protein YejF from Xanthobacter sp. DMC5

Subject, 546 a.a., oligopeptide ABC transporter ATP-binding protein from Sinorhizobium meliloti 1021

 Score =  459 bits (1180), Expect = e-133
 Identities = 248/536 (46%), Positives = 348/536 (64%), Gaps = 9/536 (1%)

Query: 1   MTTP-LLSVRDLSVAFRRGDGAPPALAVKTVSFELAKGETLALVGESGSGKSVTALSVLK 59
           MT P LL V+DL+V F    GA    A   VSF +  GETL ++GESGSGKSV+A +++ 
Sbjct: 1   MTGPHLLEVKDLTVDFLSLGGA--FRATSGVSFHVDAGETLVILGESGSGKSVSASAIMG 58

Query: 60  LLPYPSASHPSGEILFKGRDLLTVSERELRGIRGNNITMVFQEPMSSLNPLHTIERQVGE 119
           L+  P     +G + ++GRDL ++SE E R + G  I M+FQ+P+S LNP++TI  Q+ E
Sbjct: 59  LIDTPPGDICAGSVAYRGRDLSSLSEGERRDLNGRRIAMIFQDPLSHLNPVYTIGWQLEE 118

Query: 120 MLILHRGMSAHAARARTLELLAEVGIPQPEERLSAYPHQLSGGQRQRVMIAMALANEPDL 179
           +  +H   S   AR R +E+L  VGIP+PE+R+  YPHQ SGGQRQR+MI MA+A  P++
Sbjct: 119 VFTVHGVASGAEARQRAIEILGRVGIPEPEKRIDQYPHQFSGGQRQRIMIGMAIALRPEI 178

Query: 180 LIADEPTTALDVTVQAQILKLLKELQARLGMAMLFITHDLGIVRKIADRVCVMQKGEIVE 239
           LIADEPTTALDV+VQAQIL+LLK+LQA  G+A++ ITHDL +   +ADRV VM+ G IVE
Sbjct: 179 LIADEPTTALDVSVQAQILELLKKLQAEDGLAIIMITHDLEVAANMADRVIVMKSGRIVE 238

Query: 240 QGGAEETFQHPRHPYTQALLKAEPKPD----PAPIAPDAPLVMEANDLKVYFPIKRGILR 295
           +G A   F++P H YT+ L+ A P  D    P P  P    ++E  ++  ++ +  G   
Sbjct: 239 EGEARAVFENPAHSYTRTLINALPHADDRAPPRPARPAGKPILEVKNIDKFYTLSSGFFA 298

Query: 296 KTVGHVKAVDGVSIAIRRGETLGVVGESGSGKTTLGLALLRL-ISSAGPIAFLGKPIDAL 354
           K    + AV  +S  +  GET+G+VGESGSGK+T+   LL L  +S G   F G+ +  +
Sbjct: 299 KP-ARLHAVKNLSFDVAAGETIGIVGESGSGKSTVARVLLGLNEASGGEALFHGRDVLKM 357

Query: 355 SFKAMRPLRSDLQIVFQDPFGALSPRMSVAEIVGEGLLVHQRQLSADERDARVVAALADV 414
             K +   R  +Q+VFQDP+ +++PRM+V +IV E   +H+  L       RV   L  V
Sbjct: 358 DRKQLLAFRRKVQMVFQDPYSSMNPRMTVFDIVSEPWRIHKDILEKTRWRDRVTELLGLV 417

Query: 415 GLDPETRHRYPHEFSGGQRQRISIARAMALEPSFVVLDEPTSALDMIVQAQIVDLLRALQ 474
           GL+PE   RYPH+FSGGQRQRI+IARA+A +P  VV DE  SALD+ VQ Q++DLL  L+
Sbjct: 418 GLNPEHAKRYPHQFSGGQRQRIAIARALACDPELVVCDEAVSALDVSVQVQVIDLLAELR 477

Query: 475 KKRDLTFMFISHDLRVVSALASRILVMRNGKMVEEGPAHDVFEHPKEDYTRALFAA 530
            +  L ++FI+HDL +V   A RI+VM++G++VE     ++F +P+  YTR L  A
Sbjct: 478 DRLGLAYIFITHDLPIVRHFADRIIVMKSGEIVEHATTEEIFRNPQHAYTRQLINA 533



 Score =  213 bits (541), Expect = 2e-59
 Identities = 125/267 (46%), Positives = 167/267 (62%), Gaps = 13/267 (4%)

Query: 4   PLLSVRDLSVAFRRGDG--APPAL--AVKTVSFELAKGETLALVGESGSGKSVTALSVLK 59
           P+L V+++   +    G  A PA   AVK +SF++A GET+ +VGESGSGKS  A  +L 
Sbjct: 279 PILEVKNIDKFYTLSSGFFAKPARLHAVKNLSFDVAAGETIGIVGESGSGKSTVARVLLG 338

Query: 60  LLPYPSASHPSGEILFKGRDLLTVSERELRGIRGNNITMVFQEPMSSLNPLHTIERQVGE 119
           L          GE LF GRD+L +  ++L   R   + MVFQ+P SS+NP  T+   V E
Sbjct: 339 L-----NEASGGEALFHGRDVLKMDRKQLLAFR-RKVQMVFQDPYSSMNPRMTVFDIVSE 392

Query: 120 MLILHRGMSAHAA-RARTLELLAEVGIPQPEERLSAYPHQLSGGQRQRVMIAMALANEPD 178
              +H+ +      R R  ELL  VG+    E    YPHQ SGGQRQR+ IA ALA +P+
Sbjct: 393 PWRIHKDILEKTRWRDRVTELLGLVGLNP--EHAKRYPHQFSGGQRQRIAIARALACDPE 450

Query: 179 LLIADEPTTALDVTVQAQILKLLKELQARLGMAMLFITHDLGIVRKIADRVCVMQKGEIV 238
           L++ DE  +ALDV+VQ Q++ LL EL+ RLG+A +FITHDL IVR  ADR+ VM+ GEIV
Sbjct: 451 LVVCDEAVSALDVSVQVQVIDLLAELRDRLGLAYIFITHDLPIVRHFADRIIVMKSGEIV 510

Query: 239 EQGGAEETFQHPRHPYTQALLKAEPKP 265
           E    EE F++P+H YT+ L+ A PKP
Sbjct: 511 EHATTEEIFRNPQHAYTRQLINATPKP 537



 Score =  180 bits (457), Expect = 1e-49
 Identities = 111/270 (41%), Positives = 159/270 (58%), Gaps = 17/270 (6%)

Query: 275 PLVMEANDLKVYFPIKRGILRKTVGHVKAVDGVSIAIRRGETLGVVGESGSGKTTLGLAL 334
           P ++E  DL V F    G  R T        GVS  +  GETL ++GESGSGK+    A+
Sbjct: 4   PHLLEVKDLTVDFLSLGGAFRAT-------SGVSFHVDAGETLVILGESGSGKSVSASAI 56

Query: 335 LRLISS------AGPIAFLGKPIDALSFKAMRPLRSD-LQIVFQDPFGALSPRMSVAEIV 387
           + LI +      AG +A+ G+ + +LS    R L    + ++FQDP   L+P  ++   +
Sbjct: 57  MGLIDTPPGDICAGSVAYRGRDLSSLSEGERRDLNGRRIAMIFQDPLSHLNPVYTIGWQL 116

Query: 388 GEGLLVHQRQLSADERDARVVAALADVGL-DPETR-HRYPHEFSGGQRQRISIARAMALE 445
            E   VH     A+ R  R +  L  VG+ +PE R  +YPH+FSGGQRQRI I  A+AL 
Sbjct: 117 EEVFTVHGVASGAEARQ-RAIEILGRVGIPEPEKRIDQYPHQFSGGQRQRIMIGMAIALR 175

Query: 446 PSFVVLDEPTSALDMIVQAQIVDLLRALQKKRDLTFMFISHDLRVVSALASRILVMRNGK 505
           P  ++ DEPT+ALD+ VQAQI++LL+ LQ +  L  + I+HDL V + +A R++VM++G+
Sbjct: 176 PEILIADEPTTALDVSVQAQILELLKKLQAEDGLAIIMITHDLEVAANMADRVIVMKSGR 235

Query: 506 MVEEGPAHDVFEHPKEDYTRALFAAAFNLD 535
           +VEEG A  VFE+P   YTR L  A  + D
Sbjct: 236 IVEEGEARAVFENPAHSYTRTLINALPHAD 265