Pairwise Alignments
Query, 544 a.a., putative ABC transporter ATP-binding protein YejF from Xanthobacter sp. DMC5
Subject, 536 a.a., nickel import ATP-binding protein NikD from Pseudomonas aeruginosa PA14
Score = 532 bits (1371), Expect = e-155
Identities = 296/527 (56%), Positives = 371/527 (70%), Gaps = 11/527 (2%)
Query: 1 MTTPLLSVRDLSVAFRRGDGAPPALAVKTVSFELAKGETLALVGESGSGKSVTALSVLKL 60
M LL V +LSVA+ GD VK + F L GETLALVGESGSGKS TA ++L+L
Sbjct: 1 MNRELLRVENLSVAY--GD----TQVVKGIDFSLRAGETLALVGESGSGKSQTAHALLRL 54
Query: 61 LPYPSASHPSGEILFKGRDLLTVSERELRGIRGNNITMVFQEPMSSLNPLHTIERQVGEM 120
LP A+ G + G +LL +S + L IRG I MVFQEPM+SLNPL I RQVGE
Sbjct: 55 LP--GAARLGGSVRLDGEELLALSPQALLAIRGQRIGMVFQEPMTSLNPLQRIGRQVGEG 112
Query: 121 LILHRGMSAHAARARTLELLAEVGIPQPEERLSAYPHQLSGGQRQRVMIAMALANEPDLL 180
L LHR + A R R LELL G+ QP L AYPHQLSGGQRQRVM+AMALA EP LL
Sbjct: 113 LRLHRRLRGAALRGRVLELLELAGLEQPRRLLEAYPHQLSGGQRQRVMLAMALACEPQLL 172
Query: 181 IADEPTTALDVTVQAQILKLLKELQARLGMAMLFITHDLGIVRKIADRVCVMQKGEIVEQ 240
IADEPTTALDVTVQ ++L+LL+ LQ RLGMA+L I+HDL +VR++ADRVCVM G IVE+
Sbjct: 173 IADEPTTALDVTVQKRLLELLQSLQRRLGMAILLISHDLNLVRRVADRVCVMHDGRIVEE 232
Query: 241 GGAEETFQHPRHPYTQALLKAEPKPDPAPIAPDAPLVMEANDLKVYFPIKRGILRKTVGH 300
E F+ PRHPYT+ L++AEP P+A +E L + +P G LR+ G
Sbjct: 233 NACETLFRSPRHPYTRLLIEAEPGGLAEPVA-CRETCLEVRALSLDYPAPGGWLRRRAG- 290
Query: 301 VKAVDGVSIAIRRGETLGVVGESGSGKTTLGLALLRLISSAGPIAFLGKPIDALSFKAMR 360
++AV VS+ +RRG TLG+VGESGSGK++LG ALLRL+ + G I F G+ +D L K +
Sbjct: 291 LRAVHEVSLRLRRGSTLGIVGESGSGKSSLGQALLRLLPAEGQILFQGERLDRLHGKRLL 350
Query: 361 PLRSDLQIVFQDPFGALSPRMSVAEIVGEGLLVHQRQLSADERDARVVAALADVGLDPET 420
PLR Q VFQDP+G+L+PR+SV +IVGEGL +H A ER ARV+ AL +VGLD
Sbjct: 351 PLRRQFQAVFQDPYGSLNPRLSVEQIVGEGLRIHGIG-DAGERRARVLEALREVGLDEPC 409
Query: 421 RHRYPHEFSGGQRQRISIARAMALEPSFVVLDEPTSALDMIVQAQIVDLLRALQKKRDLT 480
RYPHEFSGGQRQRI+IARA+ L+P+ ++LDEPTSALD VQ Q+V+LLR LQ++ L+
Sbjct: 410 LERYPHEFSGGQRQRIAIARALVLKPALILLDEPTSALDRSVQCQVVELLRRLQRRHGLS 469
Query: 481 FMFISHDLRVVSALASRILVMRNGKMVEEGPAHDVFEHPKEDYTRAL 527
++FISHDL VV ALA ILV+++G++VE+G A +F P+ YTR L
Sbjct: 470 YLFISHDLAVVRALAHDILVLKDGRVVEQGSAAALFSQPRHPYTREL 516
Score = 199 bits (507), Expect = 2e-55
Identities = 113/238 (47%), Positives = 151/238 (63%), Gaps = 9/238 (3%)
Query: 26 AVKTVSFELAKGETLALVGESGSGKSVTALSVLKLLPYPSASHPSGEILFKGRDLLTVSE 85
AV VS L +G TL +VGESGSGKS ++L+LLP G+ILF+G L +
Sbjct: 293 AVHEVSLRLRRGSTLGIVGESGSGKSSLGQALLRLLP------AEGQILFQGERLDRLHG 346
Query: 86 RELRGIRGNNITMVFQEPMSSLNPLHTIERQVGEMLILHRGMSAHAARARTLELLAEVGI 145
+ L +R VFQ+P SLNP ++E+ VGE L +H A RAR LE L EVG+
Sbjct: 347 KRLLPLR-RQFQAVFQDPYGSLNPRLSVEQIVGEGLRIHGIGDAGERRARVLEALREVGL 405
Query: 146 PQPEERLSAYPHQLSGGQRQRVMIAMALANEPDLLIADEPTTALDVTVQAQILKLLKELQ 205
+P L YPH+ SGGQRQR+ IA AL +P L++ DEPT+ALD +VQ Q+++LL+ LQ
Sbjct: 406 DEP--CLERYPHEFSGGQRQRIAIARALVLKPALILLDEPTSALDRSVQCQVVELLRRLQ 463
Query: 206 ARLGMAMLFITHDLGIVRKIADRVCVMQKGEIVEQGGAEETFQHPRHPYTQALLKAEP 263
R G++ LFI+HDL +VR +A + V++ G +VEQG A F PRHPYT+ LL P
Sbjct: 464 RRHGLSYLFISHDLAVVRALAHDILVLKDGRVVEQGSAAALFSQPRHPYTRELLGTMP 521
Score = 177 bits (449), Expect = 9e-49
Identities = 99/239 (41%), Positives = 148/239 (61%), Gaps = 8/239 (3%)
Query: 299 GHVKAVDGVSIAIRRGETLGVVGESGSGKTTLGLALLRLISSA----GPIAFLGKPIDAL 354
G + V G+ ++R GETL +VGESGSGK+ ALLRL+ A G + G+ + AL
Sbjct: 16 GDTQVVKGIDFSLRAGETLALVGESGSGKSQTAHALLRLLPGAARLGGSVRLDGEELLAL 75
Query: 355 SFKAMRPLRSD-LQIVFQDPFGALSPRMSVAEIVGEGLLVHQRQLSADERDARVVAALAD 413
S +A+ +R + +VFQ+P +L+P + VGEGL +H+R A R RV+ L
Sbjct: 76 SPQALLAIRGQRIGMVFQEPMTSLNPLQRIGRQVGEGLRLHRRLRGAALR-GRVLELLEL 134
Query: 414 VGLDPETR--HRYPHEFSGGQRQRISIARAMALEPSFVVLDEPTSALDMIVQAQIVDLLR 471
GL+ R YPH+ SGGQRQR+ +A A+A EP ++ DEPT+ALD+ VQ ++++LL+
Sbjct: 135 AGLEQPRRLLEAYPHQLSGGQRQRVMLAMALACEPQLLIADEPTTALDVTVQKRLLELLQ 194
Query: 472 ALQKKRDLTFMFISHDLRVVSALASRILVMRNGKMVEEGPAHDVFEHPKEDYTRALFAA 530
+LQ++ + + ISHDL +V +A R+ VM +G++VEE +F P+ YTR L A
Sbjct: 195 SLQRRLGMAILLISHDLNLVRRVADRVCVMHDGRIVEENACETLFRSPRHPYTRLLIEA 253