Pairwise Alignments

Query, 292 a.a., High-affinity branched-chain amino acid transport system permease protein LivH from Xanthobacter sp. DMC5

Subject, 537 a.a., branched-chain amino acid ABC transporter permease from Sinorhizobium meliloti 1021

 Score =  157 bits (398), Expect = 4e-43
 Identities = 101/287 (35%), Positives = 156/287 (54%), Gaps = 20/287 (6%)

Query: 16  GLINGSFYALLSLGLAVIFGLLRVANFAHGAQFMLGAFSALLLMRYLNIGYWPSLF---- 71
           GL  GS   L ++GLA+ FG++ + N AHG   MLGA++  L+   +   + P LF    
Sbjct: 248 GLSLGSVLLLAAIGLAITFGVMGIINMAHGEMVMLGAYTTFLVQDVVRTSF-PHLFEWSL 306

Query: 72  -----LAPLIVGAVGVVFERLMLRRLYHLHHLYGMLLTFGFALVLQGVILDRFGASGAPY 126
                LA L+ GAVG+  ER ++R LY    L  +L T+G +L+LQ  +   FG +    
Sbjct: 307 AIALPLAFLVTGAVGLALERGVIRFLYG-RPLETLLATWGISLILQQTVRTIFGPTNREV 365

Query: 127 PAPPALRGGMDLGFMFVPIYRLWVIVVAVVVCVATWLVIEKTKLGSYLRAATENPDLLRT 186
             P  + G  +LG + +   RLW+IV A+ V  A   +++KT +G  +RA T+N  +  +
Sbjct: 366 GNPSWMSGAFELGGLAITWNRLWIIVFALAVFAALLFLLKKTPMGLQMRAVTQNRRMASS 425

Query: 187 FGVNVSTLLTATYGAGAALAGFAGVMAAPIYQVSPMMGADIIITVFAVVVAGGMGSIPGA 246
            G+    +   T+  G+ +AG AGV  + I  VSP +G   II  F VVV GG+G++ G 
Sbjct: 426 MGIRTPWVDALTFALGSGIAGIAGVALSQIDNVSPNLGQGYIIDSFMVVVFGGVGNLWGT 485

Query: 247 IITGFGLGMLEGVVKLVYPQAANSVIFAVMALVLLL-----RPAGLF 288
           ++  F LG+L    K + P  A +V+  ++ LVL++     RP GLF
Sbjct: 486 LVGAFSLGILN---KFLEPY-AGAVLGKILVLVLIILFIQKRPRGLF 528